similar to: Sweave

I've been working on a LaTeX document that contains Sweave code and cannot get MikTeX to find the Sweave.sty file. I've added the c:\rw1081\share\texmf path in the MikTeX roots (I've ven added the path in the environment variables ) but to no avail. Is there a trick to getting Sweave installed correctly when using MikTeX on Windows XP? Do I need to move/copy the Sweave.sty file to the

Hi all, I know from googling that this is a common problem; I've just tried what I understand to be the common solutions to know avail -- maybe I'm just confused. I installed Miktex 2.8 -- it seems to be working fine. I'm using this demo document: http://www.stat.berkeley.edu/~houston/demo.Rnw I've copied the Sweave.sty file into at this point multiple places on the Miktex

Hi.. I am running R version 2.3.1 on a Windows XP machine with the latest Miktex 2.5 installed. I get no errors from R when running the Sweave example, testfile <- system.file("Sweave", "Sweave-test-1.Rnw", package = "utils") However, when I tex the resulting .tex file (after installing a4.sty) I get the error below. This is pdfeTeX, Version

In the process of updating R to R 2.7 alpha or R 2.7 beta for the BioConductor 2.2 builds on Windows, I have hit a snag because the BioC build system has long path names (e.g. D:\biocbld\bbs-2.2-bioc\R) and these path names are not resolving properly by MiKTeX 2.7 during vignette construction. Take, for example, the attached vignette from Biobase, Bioconductor.Rnw. I have built R from source

Dear useRs-- I have been using Sweave with miktex for years, but on a new install on Windows XP, miktex seems to be hung up on single quotes. See example below. Digging through stackexchange, I found using \usepackage[noae]{Sweave} in the tex file solved the problem. My questions are: --Why would this happen? I have the ae package installed. --If inserting [noae] is the solution, how do I

Dear all: Just to make sure I am on the same page as everyone else. I just got a new computer and had to reinstall MikTex and of course R and Tinn-R. In order to be able to generate PDF's with Sweave I had to install notepad++ to tell Sweave where Latex.exe and yap.exe where located under MikTex path. So,I have two questions: 1- Do I need to have a Miktex editor in order to use Sweave? I am

Hi, I would appreciate some help with a very basic problem in using pgfSweave. That is, dealing with the sweave.sty file. After some googling, I did the following : (1) copied the sweave.sty file to my trial folder and (2) added the line?? \usepackage{Sweave}?? to the Rnw file. Are there more elegant ways of dealing with this issue? I have read something about letting Miktex know about the

Dear All: For a few days now I have struggled with recreating a stable LaTeX/R/Sweave environment on a new Windows XP SP3 machine. Unfortunately it seems that I ran out of good ideas and I would like your expert opinion on how I should approach this task and be successful. In essence, I installed (several times) in this order the following: R2.10.1 (and then R 2.9.2), Adobe Acrobat Reader 9

Using Sweave on Windows (MikTeX 2.5 and R 2.4.1), I've ran into a bit of a problem with the tex -> DVI process. First, I've corrected the common \usepackage error by using \usepackage{"C:/Program Files/R/R-2.4.1/share/texmf/Sweave"} to get around the spacing problem. That is, LaTeX is finding the Sweave.sty, which has been a common problem in past postings here. However, my

I created a tex file following the example in the Sweave help which produced the following files in my working directory. Sweave-test-1-006.eps Sweave-test-1-006.pdf Sweave-test-1-007.eps Sweave-test-1-007.pdf Sweave-test-1.tex When I run latex on this, I get a latex error, log file below. I am running R 2.1.1 on Windows XP. I have installed "small MiKTeX" and I have added

I am trying to learn the basics of Sweave so I read some things and a friend gave me his Rnw file to play with. I am able to do R CMD Sweave mark-example.Rnw. That works. But, then when I do latex mark-example.tex, I get the message below. I looked in the archives and Martin Morgan mentioned something in 2004 in terms of making sure that latex is looking at where Sweave.sty is but I am unsure

Hi everybody, I wanted to name a column vector (a variable). This is what I did : try<-matrix(1:4,nrow=4,ncol=1) attr(try,"dimnames")<-list(NULL,"true value") Is it OK ? Thanks for your help, Jimmy [[alternative HTML version deleted]]

Hi, I am trying to create a Bioconductor package. Everything installs and checks fine. Now I'm on my last step, which is to create a vignette. I'm trying to test the Sweave process, to make sure I can build a vignette. I am stuck at the texi2dvi stage, which fails when I try to process the example Sweave-test-1.tex file. I am using Windows binary R distributions, and have the same

Hi, I've just tried to run example-3 from Friedrich Leish. I'm using R 1.8.1 and MiKTeX 2.2 on Windows XP. I go === > library(tools) > Sweave("example-3.Snw") Writing to file example-3.tex Processing code chunks ... 1 : term hide 2 : echo term verbatim 3 : term tex 4 : term verbatim eps pdf You can now run LaTeX on example-3.tex === The file example-3.tex

Hi R-devels, I encounter the following problem when I want to build a vignette in the package building process under Windows platform i386-pc-mingw32 arch i386 os mingw32 system i386, mingw32 status major 2 minor

Hi there, I'm rying to 'turn' an Schunk in an .Rnw file(Xemacs-21.4.13, ESS-5.2.8, R-2.1, miktex-2.4.1705). Has anyone got the isorot package to work with Sweave? JC example test.Rnw: \documentclass[a4paper]{article} \usepackage{Sweave} \usepackage{isorot} \rotdriver{dvips} \clockwise \title{Sweave Example 1} \author{apologies to Friedrich Leisch } \begin{document} \maketitle

Dear R users, I am using the Sweave package and I am doing some MCMC. I have a loop function for my MCMC. Every 100 iterations, I want the number of iterations already done to appear on my screen (but not on the final document). Is that possible ? Usually I can rely on > if (i%%100==0) cat(i, "\n") but not when using Sweave. Thanks for your help, Jimmy [[alternative HTML

Hi List, I have a problem with using Latex and Sweave for creating a document. So I downloaded the Sweave manual from http://www.statistik.lmu.de/~leisch/Sweave/Sweave-manual.pdf and i have tried to replicate the example on pages 4-5, but i encounter the following problem: IT DOES NOT WORK. I can run Sweave, create the .tex file and then when building the .tex file in TeXnikCenter i get all

Dear R users, After running Sweave, this is what I get : Warning messages: 1: glm.fit: algorithm did not converge 2: glm.fit: algorithm did not converge There is no glm.fit function in my code. Where does it come from ? From Sweave ? From system.time ? Thanks for your help, Jimmy [[alternative HTML version deleted]]

Hi, This is a follow-up to the problem reported here: https://stat.ethz.ch/pipermail/r-devel/2010-September/058460.html After I updated R-2.12 to 2010-09-13 r52905 on the Bioc build system, some of the packages that have a Makefile in <pkg>/inst/doc still don't build on Windows. For example, 'R\bin\R.exe CMD build adSplit' gives: * checking for file