Displaying 20 results from an estimated 4000 matches similar to: "ANNOUNCE--Rdsm package, a threads-like environment for R"
2009 Dec 07
4
Announce: edtdbg, integrating R's debug() with your text editor
I've just developed edtdbg, a small package that integrates R's debug()
with one's text editor.
Excerpt from the README file:
Goal
The debug() function in R is primitive. My goal was to make it more
usable by integrating it with one's text editor. Hence I wrote the
package here, edtdbg. Its features include:
* As one steps from line to line of code
2009 Dec 02
5
Problem with "Cannot compute correct p-values with ties"
Dear All,
1. why did the problem happen?
2. How to solve it?
--
Best wishes,
Zhijiang Wang
--------------------------------------------
PHD Student
Room 212, Science buliding,
The International WIC Institute,
College of Computer Science and Technology,
Beijing University of Technology,
Beijing, China.
2009 Jul 08
0
Rdsm, a DSM package for parallel R programming
As I mentioned last week, I've been developing a package that I call
Rdsm ("R distributed shared memory"), modeled after a similar package,
PerlDSM, I wrote for Perl some years ago. It is now in alpha form, so
I'm not uploading to CRAN yet, but it is definitely usable, and I am
releasing it at
http://heather.cs.ucdavis.edu/~matloff/R/Rdsm
I hope many try it out, and give me
2011 Jun 10
4
running R commands asynchronously
I am interested in running R commands asynchronously.
My first choice is in the same R session that I am currently in.
Here, the goal would be to run something like
RunAsynchSameSession(myfunction(), "outputname.rda")
Once RunAsynchSameSession had started myfunction(),
RunAsynchSameSession would complete immediately. myfunction would
keep going. It is OK if execution of the
2009 Jul 02
0
another type of parallel programming for R
On 2009-07-01, David M Smith <david at revolution-computing.com> wrote:
> REvolution Computing has just released three new packages for R to
> CRAN (under the open-source Apache 2.0 license): foreach, iterators,
> and doMC. Together, they provide a simple, scalable parallel computing
> framework for R that lets you take advantage of your multicore or
> multiprocessor
2009 Oct 30
1
Multicore package: sharing/modifying variable accross processes
Hi,
I want to parallelize some computations when it's possible on multicore
machines.
Each computation produces a big objects that I don't want to store if
not necessary: in the end only the object that best fits my data have to
be returned. In non-parallel mode, a single gloabl object is updated if
the current computation gets a better result than the best previously found.
My plan
2018 Sep 12
1
Environments and parallel processing
On 12.09.2018 20:20, G?bor Cs?rdi wrote:
> This is all normal, a fork cluster works with processes, that do not
> share memory.
And if you are after shared-memory parallelism, you can try the 'Rdsm'
package: https://cran.r-project.org/package=Rdsm
Greetings
Ralf
--
Ralf Stubner
Senior Software Engineer / Trainer
daqana GmbH
Dortustra?e 48
14467 Potsdam
T: +49 331 23 61 93 11
F:
2011 Nov 30
1
Error adding Bigmemory package
I am trying to add the bigmemory packages but I get the following error
message:
In file included from bigmemory.cpp:14:0:
../inst/include/bigmemory/isna.hpp: In function 'bool neginf(double)':
../inst/include/bigmemory/isna.hpp:22:57: error: 'isinf' was not declared in
this scope
make: *** [bigmemory.o] Error 1
ERROR: compilation failed for package 'bigmemory'
* removing
2011 Jun 24
1
Installation of bigmemory fails
Hello All,
I tried to intall the bigmemory package from a CRAN mirror site and
received the following output while installing. Any idea what's going
on and how to fix it? The system details are provided below.
--------------------- begin error messages -----------------------
* installing *source* package 'bigmemory' ...
checking for Sun Studio compiler...no
checking for
2009 Dec 29
2
how can I use R functions in Fortran 90
Hi all,
Is there a way that I can import R functions into Fortran? Especially, I
want to generate random numbers from some not-so-common distributions (e.g.
inverted chi square) but did not find any routines written in Fortran that
deal with distributions other than uniform and normal.
Thanks.
Anny
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2010 Aug 11
1
Bigmemory: Error Running Example
Hi,
I am trying to run the bigmemory example provided on the
http://www.bigmemory.org/
The example runs on the "airline data" and generates summary of the csv
files:-
library(bigmemory)
library(biganalytics)
x <- read.big.matrix("2005.csv", type="integer", header=TRUE,
backingfile="airline.bin",
descriptorfile="airline.desc",
2009 Jul 20
2
kmeans.big.matrix
Hi,
I'm playing around with the 'bigmemory' package, and I have finally
managed to create some really big matrices. However, only now I
realize that there may not be functions made for what I want to do
with the matrices...
I would like to perform a cluster analysis based on a big.matrix.
Googling around I have found indications that a certain
kmeans.big.matrix() function should
2019 Jul 19
1
difficulty with sanitizer using bigmemory
Dear all,
bigKRLS, which has been on CRAN for a couple of years, had to be pulled
recently due to what seems to be a sanitizer issue stemming from its use of
bigmemory. bigKRLS works fine (we?ve used it ourselves on many different
platforms and have had over 15,000 downloads without an end user reporting
difficulties because of this issue). Unfortunately, we have been unable to
reproduce the
2012 May 05
2
looking for adice on bigmemory framework with C++ and java interoperability
I work with problems that have rather large data requirements -- typically
a bunch of multigig arrays. Given how generous R is with using memory, the
only way for me to work with R has been to use bigmatrices from bigmemory
package. One thing that is missing a bit is interoperability of bigmatrices
with C++ and possibly java. What i mean by that is API that would allow
read and write filebacked
2010 Feb 22
1
big panel: filehash, bigmemory or other
Dear R-list
I'm on my way to start a new project on a rather big panel, consisting
of approximately 8 million observations in 30 waves of data and about
15 variables. I have a similar data set that is approximately 7
gigabytes in size.
Until now I have done my data management in SAS, and Stata, mostly
identifying spells, counting events in intervals, and a like, but I
would like to
2009 Nov 07
1
How to create multiple command windows of R on Windows?
Hi there,
I am using R on Windows here. And I got a rather stupid question: how can I
create another R console? It would be nice to have multiple R consoles so
that I can separate different types of commands I use.
Thank you,
Ivan
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2009 Sep 15
1
rmutil
Hello,
I have downloaded the rmutil package in the form of *.tar.gz compressed file
(I would like to use the runge-kutta() function). The package rmutil does
not appear in the list of available packages. Can any one help?
Massoud Boroujerdi PhD
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2009 Dec 02
2
Histogram probabilities >1 ????!!!
Hi everybody,
well, I definitely don't understand anything.
Why the hist function with freq=FALSE gives such a strange result???
R <- c(-1.10, 0.79, -1.17, -0.53, -0.26, -0.22, 0.29, -0.26, -0.26, 0.39)
hist(R, freq=FALSE, breaks=10)
Thanks everybody
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2010 Jan 04
4
How to uninstall R packages
Dear all,
I am puzzled that how can i uninstall a R package that have been
installed earlier (especially in MacOS).
Any suggestion will be appreciated.
--
Wenjun
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2012 May 11
1
bigmemory
To answer your first question about read.big.matrix(), we don't know what
your acc3.dat file is, but it doesn't appear to have been detected as a
standard file (like a CSV file) or -- perhaps -- doesn't even exist (or
doesn't exist in your current directory)?
Next:
> In addition, I am planning to do a multiple imputation with MICE package
> using the data read by bigmemory