similar to: Grouped Boxplot

dear R experts: I am playing with boxplots for the first time. most of it is intuitive, although there was less info on the web than I had hoped. alas, for some odd reason, my R boxplots have some fat black dots, not just the hollow outlier plots. Is there a description of when R draws hollow vs. fat dots somewhere? [and what is the parameter to change just the size of these dots?] Also, let

I want to produce some boxplots and plot the logged values but have the axis scale in the original, not-logged scale. It seeming like I have the first few steps but I'm having trouble with the last. Here's what I'm doing (which I got for the documentation for boxplot and axis). How do I get the ticks to be labeled 2,5, and 9 of the original scale? a<-c(1,2,3,4,5,6,7,8,9,10)

Hi, I am a complete newcomer to R and although I can plot standard box-plots I am struggling with this... I have two treatments - A & B, and 2 variables 1 & 2. I want to compare boxplots of variable 1 with variable 2 for each treatment. I would also like them to all be on the same graphic. I would like treatment to be on the x axis (A and B) and above A and B have their corresponding

Hi R Users, I tried plotting a similar boxplot as it is on the FOLLOWING LINK: http://www.imachordata.com/wp-content/uploads/2009/09/boxplot.png Sample data is attached -- there are 9 years and 5 cities. In my case I'm looking to plot "Year" on x-axis and grouping boxplots by "City". I tried the following code. foo<-read.table("SampleData.csv",

how to use boxplot on all the columns from he date frame instead of manually entering the columns like below bhtest1 <- read.table("bhtest1.txt", header=TRUE) boxplot (bhtest1[,2], bhtest1[,3], bhtest1[, 4], bhtest1[,5], bhtest1[,6], bhtest1[,7]....) please help, Thanks, -- View this message in context:

hello, i can't figure out how to change the vertical position of my x axis labels.. boxplot(c(1:12)~c(rep("1",6),rep("2",6)),at=c(1,2), col=c(0,"grey"),las=1,xaxt="n") ### i put paragraphs in the x-labels because of limited horizontal space axis(1,at=c(1,2),adj=1,labels=c("Salix Scrub","Tall Forb")) ...the labels are one line

Hi, i'm very new to R, so sorry for what i'm sure is a very basic question. I'm producing a boxplot with the data below: df3<-data.frame( x=c(10,11,115,12,13,14,16,17,18,21,22,23,24,26,27,28,29,3,30,32,33,34,35,4,4 1,45,5,50,52,56,58,6,67,6738,68,7,8,9), fq=c(8,11,1,2,4,4,2,2,6,3,4,2,2,1,1,1,4,51,3,1,1,1,1,35,1,1,19,2,1,1,1,14,1, 1,1,10,13,5),

Hi, I m not able to plot normalized data(normalization by rma) using boxplot. I don't know why? basically, object(formed of normalized data) belong to ExpressionSet class. It is showing error Error in x[!xna] : object of type 'S4' is not subsettable In addition: Warning messages: 1: In is.na(x) : is.na() applied to non-(list or vector) of type 'S4' 2: In is.na(x) : is.na()

Hi R Users, I am using following R code to plot a "grouped boxplot". I'm hoping if I can add MEAN to these boxplots. Data is copied below and attached as text file. install.packages("ggplot2") library(ggplot2) dta<-read.table("Sample.txt",header=T) attach(dta) p <- ggplot(dta, aes(factor(month), nail)) p + geom_boxplot(aes(fill = factor(trt))) Data: month

I'm graphing a series of boxplots of grouped data inside a function that passes the data.frame, the names vector, and a title vector. Because both the data subset changes with each successive pass through the function, occasionally the names vector turns up with only one group to plot. This is an expected result. However, when the names argument in boxplot has only a single name, it

Dear All, Is there some way of drawing a boxplot, with R, when one does not have the original continuous data, but only the data grouped in classes? The function boxplot() can only deal with original data. Thanks in advance, Paul

my dataset looked like this in the beginning: >Daten V1 V2 V3 1 Dosis Gewicht Geschlecht 2 0 6.62 m 3 0 6.65 m 4 0 5.78 m 5 0 5.63 m I need box plots for V2 with all combination of V1 and V3, so I deleted the first row, and tried this: boxplot(Daten$V2[Daten$V3=="m"]) but it does not work and I

Dear All, I am new to R. I amazed by this software. I have a question regarding boxplot. I have three columns say X, Y,ID (X is time from 0 to 12 hrs, Y is a variable dependent on X) I can plot a simple boxplot if it is just one group. But I have 10 groups and I want to plot all of them in one graphs. Something like multiple boxplots in one graph. I am not in R mailing list please reply to me

Dear all, I am a total beginner in R, so sorry if this is the wrong place. I am using R 2.10.1 on a Mac (Mac OS 10.6.2). I have this small dataset : growth sugar 75 C 72 C 73 C 61 F 67 F 64 F 62 S 63 S I have no problem reading the table, or getting the summary, but if I try boxplot(growth~sugar, ylab="growth", xlab="sugar", data=Dataset), I have the following error :

Dear all, I have a dataset of 3 categorical factors, the mean and the standard deviation of each value. I want to use these values to plot a boxplot, grouped by each of the 3 categorical factors (24 boxplots in total). I don't have a clue on how to do the boxplot from mean and SD data already calculated. Thanks in advance [[alternative HTML version deleted]]

Hello to everyone, I am trying to compute a mean and show it to the screen and then save to later be used as a boxplot.I have used the following code: dat<-read.table(file="C:\\Documents and Settings\\Owner\\My Documents\\Yeast\\Yeast.txt",header=T,row.names=1) file.show(file="C:\\Documents and Settings\\Owner\\My Documents\\Yeast\\Yeast.txt") x<-dat[2,23:46]

Is there a quick way to make boxplots groups by two variables? By that I mean, that if x axes have values ("A","B","C"), than at each value there would be a few boxplots each for a value of second variable (say ("1","2","3")). Thank You. -- Vadim Kutsyy http://www.kutsyy.com vadim at kutsyy.com The University of

Is there a quick way to make boxplots groups by two variables? By that I mean, that if x axes have values ("A","B","C"), than at each value there would be a few boxplots each for a value of second variable (say ("1","2","3")). Thank You. -- Vadim Kutsyy http://www.kutsyy.com vadim at kutsyy.com The University of

Dear R-core team, I think I found a small inconsistency in the boxplot function. I don't want to post it as a bug since I'm not sure this might be considered as one according to the FAQ --- and this is not a major problem. Don't hesitate to tell me if I'm wrong. If you try to do a boxplot on a matrix and set the "at" argument to some vector different from 1:n, n is the

Hi: I have a question making side by side boxplot. My response is numeric and I want to make a side by side boxplot of it accroding to a factor vector. So, there are several boxplots on the same plot. Each boxplot is with respect to one level for a factor. The levels of the factor are some characters. When I make the plot, the boxplots are arranged according to the alphabetic order of the