similar to: Trellis settings get lost when printing to pdf

Hi, How does one change the dot for the median in a boxplot drawn using lattice? I have been looking at > names(trellis.par.get()) [1] "grid.pars" "fontsize" "background" [4] "panel.background" "clip" "add.line" [7] "add.text" "plot.polygon"

Dear All, I am hoping to implement a barchart using trellis graphics where all elements have a line width of 2. Using trellis.par.set(), I am able to make most elements lwd=2, but not all. In particular, the top of the box (above the upper most strip) and the left y-axis remain one point. Code with a barchart() example is below. Any advice would be greatly appreciated. Thanks for your

Hi all, Probably a simple question, but I just can't find a simple answear in the older threads or anywhere else. I've added some new vectors as columns in a data frame using cbind(). As they're all put as the last columns inte the data frame, I would like to move them to specific positions. How do you do to change the position of a column in a data frame? I know I can use

Dear all, back in 2002 Martin Henry H. Stevens wrote (https://stat.ethz.ch/pipermail/r-help/2002-May/019851.html) > How do I control the text in strips? Specifically, I want to put in the > ranges generated in shingle(x) where x is continuous. with an answer from Deepyan Sarkar (see strip.new towards the end of this message). I assume that the answer worked back then, but I've tried

Hi, My problem is simple: since having updated the lattice package, I cannot load lattice anymore. If I type in the command 'library(lattice)' the loading fails with the following message: --- cut here --- Error in library.dynam(lib, package, package.lib) : shared library 'lattice' not found In addition: Warning messages: 1: In loadNamespace(package, c(which.lib.loc,

Hi all, I've tried to make a 3D plot, but have run into some problems. I'd like to have a plot that I can rotate interactively using the mouse, which is possible using the plots3d {R.basic}. However, I would like to change the symbols used as the points, but there's no pch in plot3d(). If I use the Scatterplot3d package, I'm able to change this, but not able to rotate

Dear All, is any way I can change the colours of the box and umbrella of a bwplot without having to go to the length of: box.rectangle<-trellis.par.get("box.rectangle") box.rectangle$col<-"black" trellis.par.set("box.rectangle", box.rectangle) etc... but straight from the call: bwplot(y ~ x | z, mydata) ? Regards, Federico Calboli

dear R-help, i have looked carefully through the R-help archives for information on how to suppress whiskers in a bwplot. someone asked this question a while ago, but the answer he received is not available in the archives. but i did manage to get my hands on a panel function (called "my.panel") that is supposed to do this (the function is reproduced at the end of the email, below).

Hi: Thanks a lot to Deepayan Sarkar, author of lattice I think, who solved my first query. I am afraid that I have another one. I am plotting several mutipanels boxplots (with one conditioning variable) on one page. The x, y and conditioning variable are all continuous variables. The x and conditioning variables are transformed to shingles before being plotted. The plot looks nice but there

Background: OS: Linux Mandrake 10.1 release: R 2.0.0 editor: GNU Emacs 21.3.2 front-end: ESS 5.2.3 --------------------------------- Colleagues I have solved the miscoding with subscript and groups in panel.superpose. I was neglecting to pass in the variables correctly. "sardine.egg.T.S.space.2001.and.2002.exp" <- function() { library(lattice) library(grid) ##

Dear Nabble. I am trying to draw a box percentile plot with trellis using the panel in Hmisc. I really want to colour the plots in. I can alter several of features of the plot by changing the trellis par settings but I just can’t fill the shape in. Here is some example code which alters line colour and dot symbol: require(lattice) require(Hmisc)

Background: OS: Linux Mandrake 10.1 release: R 2.0.0 editor: GNU Emacs 21.3.2 front-end: ESS 5.2.3 --------------------------------- Colleagues I'm plotting fish egg densities in temperature-salinity space (i.e. mean temperature ~ mean salinity | fish egg densities) for two survey years. The bivariate plot is overlaid on a temperature ~ salinity plot (not means) showing the distribution of

I've managed to find how to change trellis.settings$box.rectangle$col and trellis.settings$box.umbrella$col but I can't figure out how to change the colour of the point used to indicate outliers. There doesn't seem to be a general colour. What am I overlooking? best -- ************************************************************* ___ Patrick Connolly {~._.~}

Hi, There's probably some simple way of doing this, but I'm just not seeing it - How do I get the background to be white instead of grey when I have a cloud plot (using the lattices package)? par(bg="white") isn't working. I'm assuming par commands won't work on lattice plots. What should I use instead? Thanks, Adrienne [[alternative HTML version deleted]]

Hi all, I'm new to PCA in R, so this might be a basical thing, but I cannot find anything on the net about it. I need to make a PCA plot with two response variables (df$resp1 and df$resp2) against eight metabolites (df$met1, df$met2, ...) and I don't have a clue how to do... and I've only used the simplest PCAs before, like this: pcaObj=prcomp(t(df[idx, c(40:47)]))

Hi everybody, I'm using the method described here to make a linear regression: http://www.apsnet.org/education/advancedplantpath/topics/Rmodules/Doc1/05_Nonlinear_regression.html > ## Input the data that include the variables time, plant ID, and severity > time <- c(seq(0,10),seq(0,10),seq(0,10)) > plant <- c(rep(1,11),rep(2,11),rep(3,11)) > > ## Severity

Hello (R-)Experts I hope someone can help with this problem concerning axis annotation of a lattice shingle plot. I want a plot with three shingles to display some laboratory value over time. In the first panel over the first few days, then in the next panel some months, and in the last panel some years. In the following minimal example the axis annotation will be in days, but I'd like to

Dear expeRts, I am not sure if I found a bug... I would like to create a function that itself creates a lattice plot without colors. Following http://www.mail-archive.com/r-help at r-project.org/msg64699.html I use trellis.device() to set the colors to FALSE. Whenever I call the minimal example below *with* trellis.device(), Quartz opens a window (I am working on a MAC), which it shouldn't,

I'm interested in a version of tapply() that operates with shingles instead of factors. For instance: x <- c(1,1,2,2,3,3) y <- c(1,1,1,0,0,0) s <- shingle(x,intervals=cbind(c(0.5,1.5),c(2.5,3.5))) # the following function should exist! tapply.shingle(x,s,mean) # returns the vector c(0.75,0.25) I've written such a function as follows: tapply.shingle <-

How do I control the text in strips? Specifically, I want to put in the ranges generated in shingle(x) where x is continuous. Thanks, Hank Martin Henry H. Stevens, Assistant Professor 338 Pearson Hall Botany Department Miami University Oxford, OH 45056 Office: (513) 529-4206 Lab: (513) 529-4262 FAX: (513) 529-4243 http://www.muohio.edu/~botcwis/bot/henry.html