similar to: error when installing rjags

Hi, With the sid package jags (2.0.0-1) and r-base-core (2.11.0-1), I cannot install package rjags anymore (this used to work at some point; can't recall exactly at what R/JAGS versions): ---<--------------------cut here---------------start------------------->--- R> install.packages("rjags", configure.args="--with-jags-modules=/usr/lib/JAGS/modules-2.0.0")

Trying to install latest rjags (3-5) from CRAN with JAGS 3.2.0 installed on Ubuntu 10.04, with r-devel ... the bottom line is that it fails while loading with /libs/rjags.so: undefined symbol: _ZN7Console15checkAdaptationERb Has anyone else seen this or is it a glitch somewhere in my system? thanks Ben Bolker ================== bolker at ubuntu-10-new:~/R/pkgs/rjags$ jags Welcome to

Hi, I'm trying to install rjags and R2jags with R version 2.14.1 (2011-12-22) on Linux Mint 12 machine using software repository: deb http://cran.fhcrc.org/bin/linux/ubuntu oneiric/ jags seems to install OK, but rjags gives a weird error about not finding fprec symbol. Here is a history of the problem including several attempts to work around it. (Because of Ben Bolker's recent

Hi, Here is a step-by-step guide to exactly how I've installed R in Ubuntu: http://www.nabble.com/installing-R-on-Ubuntu-td10025949.html#a21894865 Regarding rjags, here is what happened: This webpage (http://yusung.blogspot.com/2009/01/install-jags-and-rjags-in-fedora.html) recommends logging into R as sudo R, and then typing: install.packages("rjags",

Greetings, I wonder if anyone can offer any help or advice--even direction to an appropriate source of advice. I am trying to install rjags 1.0.1 on Mac OS X 10.5 (see http://www-fis.iarc.fr/~martyn/software/jags/). I have R.app 2.6.1 installed. JAGS 1.0.1 is apparently successfully installed. I (think I) know this because when I type 'jags' into Terminal, I get the following:

I have been having trouble with rjags on Ubuntu 10.04 > library(rjags) Loading required package: coda Loading required package: lattice linking to JAGS 3.2.0 module basemod loaded Error : .onLoad failed in loadNamespace() for 'rjags', details: call: dyn.load(file) error: unable to load shared object '/usr/lib/JAGS/modules-3/bugs.so': /usr/lib/JAGS/modules-3/bugs.so:

Hello folks Earlier versions of jags and rjags installed on my system without any difficulty, but I'm having trouble with jags version 4.3.0-1ubuntu2~ubuntu14.04.1~ppa1 (from Michael Rutter's R ppa) and rjags version 4.6. The call to install.packages() I always used successfully now produces the error "cannot link to JAGS library in /usr/lib/x86_64-linux-gnu."? shown below

While I have been able to install rjags on my Windows computer, oddly I have been unable to install rjags successfully on my 64-bit Linux compute server (etch, Linux kernel 2.6.18). I am required to specify the JAGS module directory upon installation; when doing this within R, I get:

I've not been able to install rjags successfully in Ubuntu 10.04 : ** testing if installed package can be loaded Error : .onLoad failed in loadNamespace() for 'rjags', details: call: dyn.load(file, DLLpath = DLLpath, ...) error: unable to load shared library '/home/scott/R/i486-pc-linux-gnu-library/2.11/rjags/libs/rjags.so': libjags.so.2: cannot open shared object file:

Quick followup. Confirmed that TCl/Tk are both installed on the machine (they are, in both 32- and 64-bit flavours), as are all tcl and tk-related libs, devel packages, and about everything else I could find. It occurred to me that perhaps the R I compiled isn't 'tcltk' aware. I checked the config.log, and there is some hint that this might be the case. Just before ## File

Hi all, I use the excellent packages rjags and cacheSweave, and unfortunately seem to have found an incompatibility between them. Below are a minimal .Rnw file and corresponding JAGS model file which illustrate the problem: *** JAGS model file; name=j.bug *** model { mu ~ dnorm(0,1.0E-5) sigma ~ dunif(0,100) for(i in 1:length(y)) { y[i] ~ dnorm(mu,sigma) } } *** *** .Rnw

i've windows 7 64 bit operating system i run latest jags backage 2.2 i make set enviroment variable for JAGS_home because the rjags in r program couldn't see the JAGS sw now the error is the following: Error : .onLoad failed in loadNamespace() for 'rjags', details: call: inDL(x, as.logical(local), as.logical(now), ...) error: unable to load shared object 'D:/Program

Hello, I am trying to install rjags on R 3.0.0 that is running on CentOS 6.4. Jags is installed and seems to be working correctly. I get the following error when trying to install from source or CRAN, configure: error: "Problem with header file /usr/include/JAGS/Console.h " See `config.log' for more details JAGS was intalled with an rpm. Does not look like the rpm included

Hi. I was trying to follow this rjags tutorial (example 1): http://www.johnmyleswhite.com/notebook/2010/08/20/using-jags-in-r-with-the-rjags-package/comment-page-1/#comment-19468 But when I try to run the following line in R, R crushes and close. jags <- jags.model('example1.bug', data = list('x' = x,'N' = N), n.chains = 4, n.adapt = 100) I'm using a Windows 64

Dear list members, I'm trying to use JAGS 2.1.0 from within R but every time I try to load the rjags package I receive the following message: Loading required package: coda Loading required package: lattice Error : .onLoad failed in loadNamespace() for 'rjags', details: call: dyn.load(file, DLLpath = DLLpath, ...) error: unable to load shared library

A few months ago, Eric asked about this for CentOS 6: https://stat.ethz.ch/pipermail/r-sig-fedora/2014-April/000310.html and was kindly helped by Marc Schwartz. OTOH, we are running Fedora 19, currently upgrading to Fedora 20. The RPM find link for 'jags-devel' which Marc provided really seems to cater to CentOS or RHEL 5, but not directly to any newer Fedora. Also there, I'd

Hello, In WinBUGS 1.4 manual (http://www.mrc-bsu.cam.ac.uk/bugs/winbugs/manual14.pdf), the gamma density is presented as dgamma(r,mu) where r and mu are the shape and rate parameters, respectively. In JAGS (rjags) manual version 1.0.2, May 9, 2008 (http://www-fis.iarc.fr/~martyn/software/jags/jags_user_manual.pdf), on page 26 the gamma density is presented as dgamma(mu,r) instead of dgamma(r,mu).

I am trying to install rjags. Although I can install the library, I cannot load the package. See below. Here is my session > sessionInfo() R version 2.9.2 (2009-08-24) i386-pc-mingw32 locale: LC_COLLATE=English_United States.1252;LC_CTYPE=English_United States.1252;LC_MONETARY=English_United States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252 attached base packages: [1] stats

Hello, I have a fairly complex hierarchical model that I using rjags to fit. Short test runs verify that it works and everything appears to be setup correctly. Now that I want to collect a larger sample from the posterior (5,000 or more). This looks like it will take several days to run on my hardware (Intel core i7, 16GB RAM) I read in the rjags documentation that there is an option for

Hi All, I am trying to install the package rjags into a local library on a machine for which I do not have root permissions. Using the command: R CMD INSTALL --configure-args="--with-jags-include= ${JAGSBIN}/include/JAGS --with-jags-lib=${JAGSBIN}/lib/ --with-jags- modules=${JAGSBIN}/lib/JAGS/modules" CMD INSTALL -l ${JAGSBIN}/lib/ ../ rjags_1.0.3-12.tar.gz Where ${JAGSBIN} is