similar to: help with Rtools and Rgraphviz

Dear experts I installed Rgraphviz with the following command: source("http://www.bioconductor.org/biocLite.R") biocLite("Rgraphviz") But had a problem when I tried to load it. This says that libcdt-4.dll is missing in your computer and the following message in R window: > library("Rgraphviz") Loading required package: graph Loading required package:

Hi, I am installing Rgraphviz at Linux Fedora Core 2 with 32 bit AMD athlon with 512 RAM. I have installed graphviz version: graphviz-1.16-1.src.rpm installed already on system. I am doing: $ R CMD INSTALL -l /usr/local/lib/R/library Rgraphviz_1.4.0.tar.gz --------------------------------- * Installing *source* package 'Rgraphviz' ... ** libs gcc -I/usr/local/lib/R/include

Dear people, I'm new here, so this is my first try. I have ubuntu 9.04 installed with R 2.8 (which surprises me because I realized that the last version R 2.9 is available but in the Synaptic Package Manager 2.8 appears as the last one). I have also graphviz 2.20.2. I have been trying to install Rgraphviz either from R running "biocLite("Rgraphviz")" and from the shell

Rgraphviz Install works fine (http://www.bioconductor.org/packages/release/bioc/html/Rgraphviz.html) Latest version of graphviz is installed as well however I get following error when loading Rgraphviz (on Mac 10.6.2) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '/Users/jb/Library/R/2.9/library/Rgraphviz/libs/i386/Rgraphviz.so':

Hi, I have problem loading Rgraphviz. Following the instructions specified by the README in Rgraphviz_1.20.3.tar.gz didn't help either. o. set the following Windows environment variables accordingly (control panel -> systems -> Advanced -> Environment Variables ): (a) create new user variables: GRAPHVIZ_INSTALL_DIR (e.g., C:\Graphviz-2.21)

Dear list, I have a lot of troubles installing Rgraphviz. I installed graphviz 2.13 from "graphviz-2.13.20061222.0540.tar" I installed the library Rgraphviz > getBioC("Rgraphviz") Running biocinstall version 2.0.8 with R version 2.5.0 Your version of R requires version 2.0 of Bioconductor. trying URL '

I'm an Rgraphviz newbie trying to figure out how to do some things/whether they are possible. Apparently graphviz does allow you to modify line widths of edges: see https://mailman.research.att.com/pipermail/graphviz-interest/2001q2/000051.html (although it looks a little obscure even in graphviz). [As discussed in the thread above, the "weight" parameter in Rgraphviz sets the

Hi, I attempted to install Rgraphviz but ran into a problem. It requires graphviz 2.20.3. I have this and installed it but the Windows 7 system path variable has to be modified to include the path to the graphviz bin file. How do I do this on Windows 7? It's been a long time since I had to change the path variable. Thanks, Walt ________________________ Walter R. Paczkowski, Ph.D.

Help with tm assocation analysis and Rgraphviz installation. THANK YOU IN ADVANCE Question 1: I saved two txt file in C:\textfile And each txt file contents only one text column, and both have 100 records. I know term “research” occurs 49 times, so I want to find out which other words are correlated to this word, and I got tons of association ‘1’ . I tried other terms, and no

Hello R users I am looking for a package to visualize "relatively planar" directed graphs, with say 100 nodes and specified using an adjacency list. 'Rgraphviz', currently listed on the R-FAQ, seemed suitable (FAQ version 2.9.2009-06-05) But when I looked for the package, I found it had been recently "removed" and was instead directed to archive copies

Hi Gabor, I just used your R code below and the code worked properly without any error messages. Attached is the output graph, which may be the one you expected. library("Rgraphviz") set.seed(123) V <- letters[1:10] M <- 1:4 g1 <- randomGraph(V, M, 0.2) g1 plot(g1) Thanks. Howard On Wed Mar 31 11:18:25 EDT 2010, Gabor Grothendieck <ggrothendieck at

Hi, I wanted to install Rgraphviz. From the R GUI, I downloaded the package but when I tried to load it I got the following error message: "This application has failed to start because libcdt-4.dll was not found. Re-installing the application may fix this problem." The R commands and errors are: > utils:::menuInstallPkgs() trying URL

Rgraphviz I cannot load it I have re-installed etc etc etc etc And cannot load it Message is 6): Library not loaded: /usr/local/lib/libgvc.3.dylib Referenced from: /Library/Frameworks/R.framework/Versions/2.6/Resources/library/Rgraphviz/lib s/ppc/Rgraphviz.so Reason: image not found Error : .onLoad failed in ''loadNamespace'' for ''Rgraphviz'' Error:

I have been trying to get Rgraphviz to work (I know it is from Bioconductor) unsuccessfully. Since I have no experience with Bioconductor I thought I would ask here if anyone has advice. I have installed Graphviz 2.20.3 as is recommended on the Bioconductor site but basically R cannot seem to find the needed dll files. So, even though I have added the appropriate directories to the system path R

Hola a todos..!! Necesito trabajar con el package classGraph, entiendo que dicho package requiere como previo a Rgraphviz. Pues bien, al tratar de cargarlo aparece el siguiente mensaje de error: Error : .onLoad failed in loadNamespace() for 'Rgraphviz', details: call: value[[3L]](cond) error: unable to load shared object

Hi Martin, It is really a 'PATH' problem. After adding C:\Program Files\Graphviz2.20\bin to the 'PATH' environment variable, the Rgraphviz package can be loaded without any error messages. Sorry that I ONLY set my 'PATH' environment variable correctly for R but not for Graphviz. Thank you and Duncan so much for your great help. Howard On Tue Mar 30 18:12:54

Just wanted to alert everyone regarding a problem that I only experience with R2.9.0 and not with R2.8.1 when I run both using exactly the same script and the same data. Here is what I do with my data "MyData", 2 predictors (V1 and V2) and my survival DV "Depvar": library(survival)

Tengo instalado el R2.9.0 y el TinnR 1.17.2.4 y cuando abro Tinn R no me detecta q el R este abierto por lo cual no me permite correr ningun programa, alguien sabe q puede estar pasando? Saludos -- José "... hoy el cambio cualitativo la liberacion, implica, cambios organicos, de instinto y biologicos, AL MISMO TIEMPO q cambios politicos y sociales" H. M. [[alternative HTML version

Hi, I want to install Rgraphviz on a windows vista pc. The only source file that I found in the bioconductor homepage is a tar file. I can't install from this using the packages command in the R menu. I would like to get some tips on how I can do the installation. Can I just place the extracted Rgraph folder (from the source tar file) in the library folder of R2.6.1 along with the other

Hi I've tried several times and followed what others suggest in installing Rgraphviz (https://stat.ethz.ch/pipermail/bioconductor/2008-June/022838.html) But I could not load library(Rgraphviz). There's a message that 'This application has failed to start because libcdt-4.dll was not found' Could anyone suggest me how to make it work? june