similar to: Changing color of points in violin plot

Using Trellis, am successfully setting up a number of panels (25) in which I have two box and violin plots. I would like to colour - one plot as RED and the other as BLUE (in each panel). I can do that with the box plots, but the violin density areas just take on one colour. My basic call is as follows: bwplot(rmsd ~ file | code, data=spread_data.filtered, panel = function(...,

Hi all (really probably just Deepayan): In the plot below I want to add text on either side of each violin plot that indicates the number of observations that are either positive or negative. I'm trying to do this with ltext() and I've also monkeyed about with panel.text(). The code below is generally what I want but my calls to ltext() are wrong and I'm not sure how to fix them.

This is a solution I am posting for a problem that others may have. If you want to: 1. Place lattice graphics from R into an Adobe InDesign document, and 2. Use the export as eps function in R to maximize resolution (it is much better than exporting as a metafile or bitmap), and 3. Use long strings of text in your titles or captions or to label your axes. Then you will have problems because:

Is it possible to create weighted boxplots or violin plots in lattice? It seems that you can specify weights for panel.histogram() and panel.densityplot(), but not for panel.bwplot or panel.violin(). Please let me know if I've missed something in the package documentation. Thanks! -- Raphael D. Mazor Freshwater Biologist Southern California Coastal Water Research Project 3535 Harbor Blv

Hi, I have some data (lots of year,distance pairs), which I can straightforwardly boxplot: dists <- read.table("movedists.dat") with(dists,plot(as.factor(V1),V2)) If I want to plot these data as violin plots using vioplot, this approach doesn't work: > with(dists,vioplot(as.factor(V1),V2)) Error in Summary.factor(c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, : min not

I'm plotting a lattice bwplot from a data.frame and would like to add some horizontal lines indicating some reference values (preferably with text annotation) as well as a grid of regular log tics. The following illustrates the plot: data(ToothGrowth) require("lattice") p = bwplot(exp(len) ~ supp, ToothGrowth, panel = function(..., box.ratio) { panel.grid(h=-1,

I am looking to replicate the functionality of the JMP diamond plot in R. I have found the following enhancement and no other references(see below). I have tried to contact the author via email and I have had no luck. Does any know if this functionality exists in R? If it does not does anyone know how to contact the author of the enhancement request? "Hi, I experimented with a set of S

I'm attempting to produce something like a violin plot to display how y changes with x for members of different groups (My specific case is how floral area changes over time for several species of plants). I've looked at panel.violin (in lattice), which makes nice violin plots, but is really set up to work on a single variable - the area trace represents the frequency of each value of x

Dear list, With the below codes, I got 8 bwplots but I would like to put 2 bwplots in one single graph so that instead of 8 separate bwplots I would have 4 graphs, each contains 2 bwplots. How can I do that? Another question is how do I add the mean as a point to each boxplot in the bwplot but also keeping the median line. for (i in 1:length(dat)){ windows() with(dat[[i]],

Dear r-helpers, tst <- data.frame(as.numeric(x <- 1:20), f <- rep(c('hi','lo'), times = 10)) with(tst, bwplot(f ~ x, panel = function(x, y){panel.bwplot(x, y, pch = '|', stats = boxplot.stats, fill = 8, varwidth = T)})) I can't figure out from the documentation how to tell stats that I would like to see notches or (even bands). Here is what I've

Hi, I'm trying to create a plot showing the density distribution of some shipping data. I like the look of violin plots, but my data is not continuous but rather binned and I want to make sure its binned nature (not smooth) is apparent in the final plot. So for example, I have the number of individuals per vessel, but rather than having the actual number of individuals I have data in the

Hi, I've got a csv file with scores like this: 40,40,40,40,40,40,40,40,40,40,40,40,40,40,40,32,38,40,20,40,26,40,30,40,5,5,13,12,40,40,3,33,29,23,2,24,9,15,4,21,16,5,26,8,8,18 40,40,40,40,40,40,40,40,40,40,40,40,40,40,40,40,40,40,40,40,40,32,40,40,30,40,40,37,34,40,36,13,40,13,40,5,40,8,29,5,15,34,5,22,14,20

I am trying to make horizontal violin plots. I have tried both vioplot and simple.violinplot, but both of them seem to not be willing to take the horizontal option. Is this correct, or am I just bungling it somehow? For instance, for vioplot (from the example shown, with the horizontal modification): > vioplot(bimodal,uniform,normal, horizontal=TRUE) Error in median(data) : need numeric data

Hello This is Elaine. I am using package lattice to generate boxplots. Using Richard's code, the display was almost perfect except the outlier shape. Based on the following code, the outliers are vertical lines. However, I want the outliers to be empty circles. Please kindly help how to modify the code to change the outlier shapes. Thank you. code package (lattice) dataN <-

Hi, I have 2 questions about bwplot in R : 1) How to change the order of my different boxes in the graph ? 2) How to rename the names of the differents boxes ? because I know how to do that with boxplot (using names) but I do not find the equivalent parameter in bwplot. thanks, C?dric

Hello, If you run the following code with lattice installed: bwplot(voice.part ~ height, data=singer, xlab="Height (inches)") There will be some text in the graph e.g. Soprano 1, Soprano 2, etc - 60, 65, etc and the title: Height (Inches). How can one make the font for this text larger and/or bold? Also, is there a way to thicken or bold the lines of the box and whisker plot? Thank

Inspired by colouring the dots of box-whisker plots I am trying to also fill the boxes (rectangles) with different colours. This seems not to work as I expected. Looking at the help page of panel.bwplot it says: 'fill - color to fill the boxplot'. Obviously it is only intended to fill all boxes with only one colour? Nevertheless the following example shows, that 'fill' from

Hello, I am making a boxplot of 13 boxes. I tried to color the box using 13 colors but failed. Only red and brown were displayed. Green, blue, and grey disappeared. Please kindly advise modification after checking the code below. Thank you in advance. Elaine R code # data input dataN <-read.csv("H:/a_mig_distance_B_NB/R_data/Mig_bird_586_20120925.csv",header=T, row.names=1)

Hi - I have some data consisting of a number of observations within each of 15 countries. Each country falls into one of two groups. I'd like to use the lattice library's bwplot to present boxplots of the country-level data, with a separate panel for each group, but showing only the relevant countries in each panel. Here's an analogous example using the "singer" data

Hi, im a newbie with very wobbly coding abilities. Tearing my hair out over getting the boxplot i want... I have a dataset called 'eagle' which consists of year (2011 or 2012), month (jan - dec), roof (TT6, TT13 or BARE) and temp (the continuous variable that i want to plot). So i want boxplots of the three roof treatments in every month organised in chronical order along x axis 2011 -