search for: zscores

Hi I was looking through the help on how to get standardized scores and came across an anomaly. The help.search("zscore") reports there is such a function in R.base. However, when I try to get help on zscore it reports no such function and says that R.base in built for win32. I'm running the Mac OS X version of R with the smorgasboard of packages that are included in that

Hi, I have a data.frame(zscores) that looks like this: gA gB g1 0.2 0.6 g2 0.3 Na My problem is that I need to use a function and the output is a vector of only the non NA values, so shorter than the list I would obtain dropping the data.frame. What is the cleanest way to keep row and column names or putti...

Hi, I am writing a basic function to extract the z scores for some linear regression coefficients: zscore<-function( y, x) { lm<-lm( y ~ x ) z <- coef(lm)/sqrt(diag(vcov(lm))) return(z) } I would like to pass a dataframe to the function as a argument so the function call changes from zscore(df$y1,df$x1) to zscore(y1,x1,data=df) but I am not sure how to reference the data

Hi, R 1.0.1, on Linux(mandrake/RedHat). I am trying to write my first function using R and I need help figuring out the error I have indicated in the Subject line above. The purpose of the function is not to "wow" anyone, but just to serve as a stepping stone so that I might write more complicated functions in the future. First I created my function named "CIfunc" and saved

Forwarded Message: > To: Steve Arthur <sarthur at crick.protogene.com> > From: Thomas Lumley <thomas at biostat.washington.edu> > Subject: Re: [R] couldn't find function "..." > Date: Wed, 5 Jul 2000 16:16:25 -0700 (PDT) > ----- > On Wed, 5 Jul 2000, Steve Arthur wrote: > > > Hi, > > > > R 1.0.1, on Linux(mandrake/RedHat).

Hi All: I was looking for, but could not locate in the packages, or in the R archive searches if there exists an R implementation of Cuzick's test of trend. The test is described as follows: An extension of the Wilcoxon rank-sum test is developed to handle the situation in which a variable is measured for individuals in three or more (ordered) groups and a non-parametric test for trend

Dear R Help list, My question is regarding extracting the standard error or Z-score from a cph or coxph call. My Cox model is: - modz=cph(Surv(TSURV,STATUS)~RAGE+DAGE+REG_WTIME_M+CLD_ISCH+POLY_VS, data=kidneyT,method="breslow", x=T, y=T) I've used names(modz) but can't see anything that will let me extract the Z scores for each coefficient or the standard errors in the same

-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Hi, I just installed R (2.11.1) 64bit under Windows 7 64 bit When trying to readin files I get the following error message: > > source(file="C:\\Users\\me\\Documents\\My PhD\\Modelling\\R\\Scripts\\Functions\\functions 20jan10.r") Error in file(file, "rt") : cannot open the connection In addition: Warning message: In

Dear useRs, The seqinR package is a library of utilities to retrieve and analyse biological sequences. A new version of seqinR, seqinR 1.0-7, has been released on CRAN. Here is a summary of changes: o A new *experimental* function extractseqs() to download sequences thru zlib compressed sockets from an ACNUC server is released. Preliminary tests suggest that working with about 100,000

Dear useRs, The seqinR package is a library of utilities to retrieve and analyse biological sequences. A new version of seqinR, seqinR 1.0-7, has been released on CRAN. Here is a summary of changes: o A new *experimental* function extractseqs() to download sequences thru zlib compressed sockets from an ACNUC server is released. Preliminary tests suggest that working with about 100,000

Greetings - While I've used R a fair bit for basic statistical machinations, I've not used it for data manipulation - I've used SAS for 20+ years (and SAS real shines in data handling). So, I've started the process of trying to figure out 'how to do in R what I can do in my sleep in SAS' - specifically wrt to data manipulating. So, these are decidely 'newbie' level

Regarding unusual combinations of factors in categorical data. Are there any R packages that can be used to identify the outliers i.e. unusual combinations in categorical datasets ? Thanks. ================================================================================ Notice of Confidentiality This transmission contains information that may be confidential and that may also be