Displaying 4 results from an estimated 4 matches for "ysub".
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2012 Feb 23
2
Advice on exploration of sub-clusters in hierarchical dendrogram
...dendrogram and focus on specific clusters from
which to derive the sub-clusters at a new given cutoff height.
I recently found in this page
http://manuals.bioinformatics.ucr.edu/home/R_BioCondManual
http://manuals.bioinformatics.ucr.edu/home/R_BioCondManual
the following code:
clid <- c(1,2)
ysub <- y[names(mycl[mycl%in%clid]),]
hrsub <- hclust(as.dist(1-cor(t(ysub), method="pearson")),
method="complete") # Select sub-cluster number (here: clid=c(1,2)) and
generate corresponding dendrogram.
Even with this given example I am afraid I can't work my way around.
S...
2019 Mar 15
1
Could we make filled.contour() more suitable for PDF viewers?
...I've decided not to use filled.contour() because of this.
Note that filled.contour() calls .filled.contour(), which calls:
+ .External.graphics(C_filledcontour, x, y, z, levels, col)
Also note that I had a similar plot with a similar problem.
It contained the following line:
+ polygon (xsub, ysub, border=NA, col=colstr)
But the problem was corrected after changing it to:
+ polygon (xsub, ysub, border=colstr, col=colstr)
I'm assuming that an equally simple change to C_filledcontour, could
correct the problem above.
[[alternative HTML version deleted]]
2011 Jan 20
0
selecting predictors for model from dataframe
...itrary outcome
variable Y. These predictors are to be placed in a model, and regression
coefficients estimated in a new small dataset.
This is what I got:
#First I sample a small dataset from the large one, lrm is logistic
regression from the Design package (as is the command fastbw)
fsubset=lrm(Ysub~X1sub+X2sub+X3sub+X4sub, data=dsubset1)
variables[i]=as.vector(fastbw(fsubset, rule="p", type="individual",
sls=0.5)[2])
variables=unlist(variables[i])
#So my "variables" are the significant ones.
#Below is the sampling of the testset, in which I want to estimate a mo...
2007 Sep 24
1
IE memory leak and update()
Hello
I have following code in my project and it''s a question for me if it
causes memory leaks in IE.
pagePart = getSearchResult(); // retrieve part of the page w/ search
result from server
$(''container'').update(pagePart);
$$(''#container a'').each(function(a) {
Event.observe(a, ''click'', ...); // handlers for link clicks
});
As you