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Dear R user, I try to build R-2.8.1 on SunOS 5.9, and use following command: CC="cc -xarch=v9" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v9" FFLAGS="-xO5 -xlibmil -dalign" CXX="CC -xarch=v9" CXXFLAGS="-xO5 -xlibmil -dalign" FC="f95 -xarch=v9" FCFLAGS="-xO5 -xlibmil -dalign" LIBnn="lib"...

...12 compilers. I'm trying to build a 64-bit version of R-2.6.1, and while the configure script runs, the make does not. Here are the options I set in config.site: ________________________________________________________________________ _ R_PAPERSIZE=letter CC="cc -m64" CFLAGS="-xO5 -xlibmil -xmemalign=8s" F77="f95 -m64" FFLAGS="-xO5 -xlibmil -xmemalign=8s" LDFLAGS="-L/opt/SUNWspro/lib/v9 -L/usr/local/lib" CXX="CC -m64" CXXFLAGS="-xO5 -xlibmil -xmemalign=8s" FC="f95 -m64" FCFLAGS="-xO5 -xlibmil -xmemalign=8s...

...g update.packages(). I got an error for splancs and sgeostat. Trying to install them 'manually' with R CMD INSTALL, I got the following errors. 1) for splancs: Tue<15:26>library[82]#R CMD INSTALL splancs_2.01-5.tar.gz Installing *source* package `splancs' ... libs f95 -PIC -xO5 -dalign -xlic_lib=sunperf -c areapl.f -o areapl.o f95 -PIC -xO5 -dalign -xlic_lib=sunperf -c cncvwt.f -o cncvwt.o f95 -PIC -xO5 -dalign -xlic_lib=sunperf -c dokhat.f -o dokhat.o f95 -PIC -xO5 -dalign -xlic_lib=sunperf -c inpip.f -o inpip.o f95 -PIC -xO5 -dalign -xlic_lib=sunperf -c ipip...

...ame: rodney sparapani Version: 1.9.0 OS: Solaris 9 Submission from: (NULL) (141.106.120.97) I'm following the instructions for the Sun Forte compiler. I had success with 1.8.1 so I think the compiler settings are correct (config.site): CC="cc -xarch=v8plusa" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v8plusa" FFLAGS="-xO5 -xlibmil -dalign" CXX="CC -xarch=v8plusa" CXXFLAGS="-xO5 -xlibmil -dalign" Actually, there is one thing that I didn't specify above, but I'm not sure how. The Sun Perfor...

...e problem with the break in the make process I am worried about. I am using 64 bit Solaris, with the 64 bit with Sun Forte flags as advocated in Appendix B. 7.2 of the Installation Guide. I compiled readline with the same flags. For definiteness, they are CC="cc -xarch=v9" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v9" FFLAGS="-xO5 -xlibmil -dalign" CXX=CC CXXFLAGS="-xO5 -xlibmil -dalign -xarch=v9" Without readline, the make command exectutes fine. Here is the actual bug mkdir -p -- ../../../../library/methods/libs make[5]: Leaving direct...

...o, I have updated my OS from Solaris 2.7 to Solaris 2.8, and I am trying to build R 1.9.1. Configure seems to run fine, resulting in the message: R is now configured for sparc-sun-solaris2.8 Source directory: . Installation directory: /usr/local C compiler: cc -xO5 -dalign -xlic_lib=sunperf C++ compiler: CC -xO5 -dalign Fortran compiler: f95 -xO5 -dalign -xlic_lib=sunperf Interfaces supported: X11 External libraries: BLAS(none), LAPACK(in blas) Additional capabilities: PNG, JPEG Options enabled: R p...

...g for rl_callback_read_char in -lreadline... no checking for history_truncate_file... no configure: error: --with-readline=yes (default) and headers/libs are not available My R-2.2.1/config.site has the following changes from default: CC="cc -xtarget=opteron -xarch=amd64" CFLAGS="-xO5 -xlibmil -dalign" CPPFLAGS=-I/opt/sfw/include -I/opt/sfw/include/readline \ -I/opt/csw/include -I/opt/SUNWspro/include -I/opt/csw/include/readline F77="f95 -xarch=amd64 -xtarget=opteron" FFLAGS="-xO5 -xlibmil -dalign" LDFLAGS=-L/opt/SUNWspro/lib/amd64/ -L/opt/sfw/lib -L/opt...

Invocation of randomForest() using the iris example in the help file crashes R with a segmentation fault. This happens on all of our ultraSPARC machines running Solaris 2.7. We're using R-1.4.1, compiled using Sun cc and f77 and the flags: CC=cc CFLAGS="-xO5 -xlibmil -dalign" FC=f77 FFLAGS="-xO5 -xlibmil -dalign" "make check" runs withour errors, and R has been working well for all other applications/installations. Incidentally, randomForest() runs fine on one of our ultraSPARC machines running Solaris 2.6 and R-1.4.1 compil...

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...the sgemm sunperf test passes!). Quick fix: Add the recommended flag to the compiler env vars Description: ----------- I'm setting the following env vars before running configure, as per the admin guide: export PATH=/usr/ccs/bin:$PATH export CC="cc -xarch=v9" export CFLAGS="-xO5 -xlibmil -dalign" export F77="f95 -xarch=v9" export FFLAGS="-xO5 -xlibmil -dalign" export CXX="CC" export CXXFLAGS="-xO5 -xlibmil -dalign" Config.log reports the following: configure:19929: checking for sgemm_ in -lsunperf configure:19966: cc -xarch=v9...

Hi All, I am having some problems with my R compile and matrix.c My config setings are:- setenv CC "cc -xarch=amd64" setenv F77 "f95 -xarch=amd64" setenv CXX "CC -xarch=amd64" setenv CFLAGS "-xO5 -xlibmil -dalign" setenv FFLAGS "-xO5 -xlibmil -dalign" setenv CXXFLAGS "-xO5 -xlibmil -dalign" setenv SHLIB_CXXLDFLAGS -lCstd setenv LDFLAGS "-L/usr/local/SUNWspro/lib/amd64 -L/usr/local/SUNWspro/lib -L/usr /local/lib" I've installed a 64bit tcl/tk and read...

...2.8 arch sparc os solaris2.8 system sparc, solaris2.8 status beta major 1 minor 6.0 year 2002 month 09 day 18 language R and I'm using the follwing modification to config.site (which I have used on a regular basis in the past). CC="cc" CFLAGS="-xO5 -xlibmil -dalign" F77="f95" FFLAGS="-xO5 -xlibmil -dalign" CXX="CC" CXXFLAGS="-xO5 -xlibmil -dalign" and I'm using the solaris make program... -- _________________________________________________________ Gardar Johannesson Department of Stat...

...g for rl_callback_read_char in -lreadline... no checking for history_truncate_file... no configure: error: --with-readline=yes (default) and headers/libs are not available My R-2.2.1/config.site has the following changes from default: CC="cc -xtarget=opteron -xarch=amd64" CFLAGS="-xO5 -xlibmil -dalign" CPPFLAGS=-I/opt/sfw/include -I/opt/sfw/include/readline \ -I/opt/csw/include -I/opt/SUNWspro/include -I/opt/csw/include/readline F77="f95 -xarch=amd64 -xtarget=opteron" FFLAGS="-xO5 -xlibmil -dalign" LDFLAGS=-L/opt/SUNWspro/lib/amd64/ -L/opt/sfw/lib -L/opt...

...1 ERROR: compilation failed for package ?Matrix? * Removing ?/home/user/R/R-devel/library/Matrix? Can someone help me or give me a pointer what I'm making wrong? How can I get/include the missing shared library? Many thanks in advance Thomas Petzoldt #file: config.site CC=cc CFLAGS="-xO5 -xc99 -xlibmil -nofstore" CPICFLAGS=-Kpic F77=f95 FFLAGS="-O5 -libmil -nofstore" FPICFLAGS=-Kpic CXX=CC CXXFLAGS="-xO5 -xlibmil -nofstore" CXXPICFLAGS=-Kpic FC=f95 FCFLAGS=$FFLAGS FCPICFLAGS=-Kpic LDFLAGS=-L/opt/sun/sunstudio12/lib/amd64 SHLIB_LDFLAGS=-shared SHLIB_CXXLDFLA...

Using the 64-bit Solaris compilers make check dumps core in La_rs at 73 F77_CALL(dsyev)(jobv, uplo, &n, rx, &n, rvalues, work, &lwork, &info); I can't reproduce it easily, but example(eigen) occasionally stops with Error: abs(sm - V %*% diag(lam) %*% t(V)) < 60 * Meps is not TRUE which might be connected. The tiny rounding errors in example(eigen) aren't

...4.0 from source, results in the following (short summary list) of compiling flags: BLAS = blas.o BLAS_LIBS = CC = cc CFLAGS = -g FC = f77 FFLAGS = -g Following suggestions given in R-admin.html, I also build R-1.4.0 with: BLAS = BLAS_LIBS = -xlic_lib=sunperf -lsunmath CC = cc -xarch=v9 CFLAGS = -xO5 -xlibmil -dalign FC = f95 -xarch=v9 FFLAGS = -xO5 -xlibmil -dalign I did few tests comparing the speed of these two builds. In short, I saw about 65% speed improvement for general use, slightly more for regression problems (2-3 times), and considerable more in matrix multiplication (50 times). H...

These come courtesy of Sun Studio 11 on Solaris 10 in case you care: "http11.c", line 54: warning: syntax error: empty declaration "http11.c", line 55: warning: syntax error: empty declaration "http11.c", line 56: warning: syntax error: empty declaration "http11.c", line 57: warning: syntax error: empty declaration "http11.c", line 58:

...utput file name configure:1625: dmake: defaulting to parallel mode. See the man page dmake(1) for more information on setting up the .dmakerc file. /opt/studio12/SUNWspro/bin/cc -m64 dmake: defaulting to parallel mode. See the man page dmake(1) for more information on setting up the .dmakerc file. -xO5 -xc99 -xlibmieee -xlibmil -nofstore conftest.c >&5 ./configure: line 1626: dmake:: command not found configure:1628: $? = 127 configure: failed program was: | /* confdefs.h. */ | | #define PACKAGE_NAME "" | #define PACKAGE_TARNAME "" | #define PACKAGE_VERSION "&...

I have inserted some probes in my application, and it works great in the "debug build" I have been using. So I wanted to look at the "overhead" introduced by inactive dtrace probes in my application. I am using the Sun Studio 11 compiler, so I added the following options: -xO5 -g0 -xbuiltin But this breaks the linking of my application. Undefined first referenced symbol in file __SLIP.DELETER__B dtrace.o __SLIP.DELETER__D dtrace.o __SLIP.DELETER__E dtrace.o (the dt...

Hi, I've built 64-bit dovecot 1.0.2 on Opensolaris to replace version 1.0.0rc10. It functions fine, but when I connect, it eats up all available cpu. My guess is that the poll thread is running continuously. Any ideas on what I should do to verify this or does anyone know of a fix? Thanks, Gary -------------- next part -------------- A non-text attachment was scrubbed... Name: gary.vcf