search for: xlibmil

Dear R user, I try to build R-2.8.1 on SunOS 5.9, and use following command: CC="cc -xarch=v9" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v9" FFLAGS="-xO5 -xlibmil -dalign" CXX="CC -xarch=v9" CXXFLAGS="-xO5 -xlibmil -dalign" FC="f95 -xarch=v9" FCFLAGS="-xO5 -xlibmil -dalign" LIBnn="lib" ./co...

...ompilers. I'm trying to build a 64-bit version of R-2.6.1, and while the configure script runs, the make does not. Here are the options I set in config.site: ________________________________________________________________________ _ R_PAPERSIZE=letter CC="cc -m64" CFLAGS="-xO5 -xlibmil -xmemalign=8s" F77="f95 -m64" FFLAGS="-xO5 -xlibmil -xmemalign=8s" LDFLAGS="-L/opt/SUNWspro/lib/v9 -L/usr/local/lib" CXX="CC -m64" CXXFLAGS="-xO5 -xlibmil -xmemalign=8s" FC="f95 -m64" FCFLAGS="-xO5 -xlibmil -xmemalign=8s" __...

...rodney sparapani Version: 1.9.0 OS: Solaris 9 Submission from: (NULL) (141.106.120.97) I'm following the instructions for the Sun Forte compiler. I had success with 1.8.1 so I think the compiler settings are correct (config.site): CC="cc -xarch=v8plusa" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v8plusa" FFLAGS="-xO5 -xlibmil -dalign" CXX="CC -xarch=v8plusa" CXXFLAGS="-xO5 -xlibmil -dalign" Actually, there is one thing that I didn't specify above, but I'm not sure how. The Sun Performance lib...

...blem with the break in the make process I am worried about. I am using 64 bit Solaris, with the 64 bit with Sun Forte flags as advocated in Appendix B. 7.2 of the Installation Guide. I compiled readline with the same flags. For definiteness, they are CC="cc -xarch=v9" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v9" FFLAGS="-xO5 -xlibmil -dalign" CXX=CC CXXFLAGS="-xO5 -xlibmil -dalign -xarch=v9" Without readline, the make command exectutes fine. Here is the actual bug mkdir -p -- ../../../../library/methods/libs make[5]: Leaving directory `/afs...

...igure: creating ./config.status config.status: creating src/Makevars ** libs CC -xtarget=generic64 -I/export/home/choid/bin/R2.2.1/lib/R/include -I/usr/openwin/include -DHAVE_PNG_H -I/usr/include/libpng12 -I/mounts/devel/SUNWspro/prd/include -I/mounts/devel/GNU/repoz/readline43/include -KPIC -O -xlibmil -dalign -I/mounts/devel/SUNWspro/prod/include -c api.cpp -o api.o CC: Warning: Option -dalign passed to ld, if ld is invoked, ignored otherwise CC -xtarget=generic64 -I/export/home/choid/bin/R2.2.1/lib/R/include -I/usr/openwin/include -DHAVE_PNG_H -I/usr/include/libpng12 -I/mounts/devel/SUNWspro/pr...

...rl_callback_read_char in -lreadline... no checking for history_truncate_file... no configure: error: --with-readline=yes (default) and headers/libs are not available My R-2.2.1/config.site has the following changes from default: CC="cc -xtarget=opteron -xarch=amd64" CFLAGS="-xO5 -xlibmil -dalign" CPPFLAGS=-I/opt/sfw/include -I/opt/sfw/include/readline \ -I/opt/csw/include -I/opt/SUNWspro/include -I/opt/csw/include/readline F77="f95 -xarch=amd64 -xtarget=opteron" FFLAGS="-xO5 -xlibmil -dalign" LDFLAGS=-L/opt/SUNWspro/lib/amd64/ -L/opt/sfw/lib -L/opt/csw/lib...

I am trying to compile R on Linux using SunStudio. Configure flags are mostly as suggested in the R install guide. CC=/opt/sun/sunstudio12.1/bin/suncc CFLAGS="-g -xc99 -xlibmil -xlibmieee" MAIN_CFLAGS=-g SHLIB_CFLAGS=-g CPPFLAGS="-I. -I/opt/sun/sunstudio12.1/prod/include -I/opt/sun/sunstudio12.1/prod/include/cc" CPPFLAGS+="-I/opt/sun/sunstudio12.1/prod/include/cc/sys -I/usr/local/include" F77=/opt/sun/sunstudio12.1/bin/sunf95 FFLAGS="-g -O -l...

...9 on a SunBlade 100, with "Sun WorkShop 6 update 2 C++ 5.3 2001/05/15" as the C++ compiler, I just did > install.packages("e1071") The output includes these lines, which I have wrapped to fit nicely in mail: ** libs cc -I/users/local/lib/R/include -I/usr/local/include -KPIC -xlibmil \ -dalign -xO4 -c cmeans.c -o cmeans.o cc -I/users/local/lib/R/include -I/usr/local/include -KPIC -xlibmil \ -dalign -xO4 -c cshell.c -o cshell.o cc -I/users/local/lib/R/include -I/usr/local/include -KPIC -xlibmil \ -dalign -xO4 -c floyd.c -o floyd.o cc -I/users/local/lib/R/include -I/usr/loc...

Thank you Martyn, I am one step closer. Using R-patched, configure was successful. However, make exited with an error. Configure summary: Installation directory: /usr/local C compiler: /opt/sun/sunstudio12.1/bin/suncc -g -O -xc99 -xlibmil -m32 -xlibmieee -nofstore Fortran 77 compiler: /opt/sun/sunstudio12.1/bin/sunf95 -g -O -libmil -m32 -nofstore C++ compiler: /opt/sun/sunstudio12.1/bin/sunCC -g -O -xlibmil -m32 -xlibmieee -nofstore Fortran 90/95 compiler: /opt/sun/sunstudio12.1/bin/sunf95 -g -O -libm...

Invocation of randomForest() using the iris example in the help file crashes R with a segmentation fault. This happens on all of our ultraSPARC machines running Solaris 2.7. We're using R-1.4.1, compiled using Sun cc and f77 and the flags: CC=cc CFLAGS="-xO5 -xlibmil -dalign" FC=f77 FFLAGS="-xO5 -xlibmil -dalign" "make check" runs withour errors, and R has been working well for all other applications/installations. Incidentally, randomForest() runs fine on one of our ultraSPARC machines running Solaris 2.6 and R-1.4.1 compiled using...

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...sgemm sunperf test passes!). Quick fix: Add the recommended flag to the compiler env vars Description: ----------- I'm setting the following env vars before running configure, as per the admin guide: export PATH=/usr/ccs/bin:$PATH export CC="cc -xarch=v9" export CFLAGS="-xO5 -xlibmil -dalign" export F77="f95 -xarch=v9" export FFLAGS="-xO5 -xlibmil -dalign" export CXX="CC" export CXXFLAGS="-xO5 -xlibmil -dalign" Config.log reports the following: configure:19929: checking for sgemm_ in -lsunperf configure:19966: cc -xarch=v9 -o conft...

...reason, the Foreign package will not build initially. So delete src/library/Recommended/foreign.tgz and create src/library/Recommended/foreign.ts #4. setup your environment to be as free software-friendly as possible with /opt/sfw/bin in your PATH: CONFIG_SHELL=/usr/xpg4/bin/sh CC=cc GCC= CFLAGS=-xlibmil -dalign CXX=CC CXXFLAGS=-xlibmil -dalign F77=f95 F95=f95 FFLAGS=-xlibmil -dalign CPP=/opt/sfw/bin/cpp CPPFLAGS=-I/opt/sfw/include LDFLAGS=-L/opt/sfw/lib BLAS_LIBS=-xlic_lib=sunperf #5. configure, make and install configure --with-blas --with-lapack gmake gmake install cd src/library/Recommended R...

Hi All, I am having some problems with my R compile and matrix.c My config setings are:- setenv CC "cc -xarch=amd64" setenv F77 "f95 -xarch=amd64" setenv CXX "CC -xarch=amd64" setenv CFLAGS "-xO5 -xlibmil -dalign" setenv FFLAGS "-xO5 -xlibmil -dalign" setenv CXXFLAGS "-xO5 -xlibmil -dalign" setenv SHLIB_CXXLDFLAGS -lCstd setenv LDFLAGS "-L/usr/local/SUNWspro/lib/amd64 -L/usr/local/SUNWspro/lib -L/usr /local/lib" I've installed a 64bit tcl/tk and readline...

...rch sparc os solaris2.8 system sparc, solaris2.8 status beta major 1 minor 6.0 year 2002 month 09 day 18 language R and I'm using the follwing modification to config.site (which I have used on a regular basis in the past). CC="cc" CFLAGS="-xO5 -xlibmil -dalign" F77="f95" FFLAGS="-xO5 -xlibmil -dalign" CXX="CC" CXXFLAGS="-xO5 -xlibmil -dalign" and I'm using the solaris make program... -- _________________________________________________________ Gardar Johannesson Department of Statistics Th...

...rl_callback_read_char in -lreadline... no checking for history_truncate_file... no configure: error: --with-readline=yes (default) and headers/libs are not available My R-2.2.1/config.site has the following changes from default: CC="cc -xtarget=opteron -xarch=amd64" CFLAGS="-xO5 -xlibmil -dalign" CPPFLAGS=-I/opt/sfw/include -I/opt/sfw/include/readline \ -I/opt/csw/include -I/opt/SUNWspro/include -I/opt/csw/include/readline F77="f95 -xarch=amd64 -xtarget=opteron" FFLAGS="-xO5 -xlibmil -dalign" LDFLAGS=-L/opt/SUNWspro/lib/amd64/ -L/opt/sfw/lib -L/opt/csw/lib...

...mpilation failed for package ?Matrix? * Removing ?/home/user/R/R-devel/library/Matrix? Can someone help me or give me a pointer what I'm making wrong? How can I get/include the missing shared library? Many thanks in advance Thomas Petzoldt #file: config.site CC=cc CFLAGS="-xO5 -xc99 -xlibmil -nofstore" CPICFLAGS=-Kpic F77=f95 FFLAGS="-O5 -libmil -nofstore" FPICFLAGS=-Kpic CXX=CC CXXFLAGS="-xO5 -xlibmil -nofstore" CXXPICFLAGS=-Kpic FC=f95 FCFLAGS=$FFLAGS FCPICFLAGS=-Kpic LDFLAGS=-L/opt/sun/sunstudio12/lib/amd64 SHLIB_LDFLAGS=-shared SHLIB_CXXLDFLAGS="-G -lC...

Using the 64-bit Solaris compilers make check dumps core in La_rs at 73 F77_CALL(dsyev)(jobv, uplo, &n, rx, &n, rvalues, work, &lwork, &info); I can't reproduce it easily, but example(eigen) occasionally stops with Error: abs(sm - V %*% diag(lam) %*% t(V)) < 60 * Meps is not TRUE which might be connected. The tiny rounding errors in example(eigen) aren't

...nwin/lib, headers /usr/openwin/include checking for libpng-config... yes configure: creating ./config.status config.status: creating src/Makevars ** libs CC -I/users/local/lib/R/include -I/usr/openwin/include -DHAVE_PNG_H -I/usr/local/include -Wall -pedantic -fno-exceptions -fno-rtti -KPIC -xO4 -xlibmil -dalign -c x11lib.cpp -o x11lib.o CC: Warning: Option -Wall passed to ld, if ld is invoked, ignored otherwise CC: Warning: Option -pedantic passed to ld, if ld is invoked, ignored otherwise CC: Warning: Option -fno-exceptions passed to ld, if ld is invoked, ignored otherwise ... erwise CC: Warning:...

...LDFLAGS="-L/opt/yp/lib -R/opt/yp/lib -L/usr/sfw/lib/64 -R/usr/sfw/lib/ 64 -L/usr/ sfw/lib -R/usr/sfw/lib -L/usr/lib/64 -R/usr/lib/64 -L/usr/lib -R/usr/ lib" # Compiler Flags #CFLAGS="-m64 -xarch=sse2 -fns -fsimple=2 -fsingle -nofstore - xalias_level=basic -xbuiltin=%all -xdepend -xlibmil -xlibmopt -xO5 -xregs=frameptr -mt - lpthread" CXX=CC #CXXFLAGS="-m64 -xarch=sse2 -fns -fsimple=2 -fsingle -nofstore - xalias_level=bas ic -xbuiltin=%all -xdepend -xlibmil -xlibmopt -xO5 -xregs=frameptr -mt -lpthread " #CFLAGS="-fast -xarch=amd64" #CXXFLAGS="-fast...