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...imilarities instead of dissimilarities. since the help document of hierclust mentions the parameter "sim", which seems good to me, but it doesn't appear in the code of hierclust() function again? and no sample about it. so could anybody please help me as author? thanks in advance xinan yang xinan@molgen.mpg.de

...imilarities instead of dissimilarities. since the help document of hierclust mentions the parameter "sim", which seems good to me, but it doesn't appear in the code of hierclust() function again? and no sample about it. so could anybody please help me as author? thanks in advance xinan yang xinan at molgen.mpg.de

...m install of libxml2-2.5.4-3.rh9 conflicts with file from package libxml2-2.5.4-1 file /usr/share/man/man3/libxml.3.gz from install of libxml2-2.5.4-3.rh9 conflicts with file from package libxml2-2.5.4-1 %%%%%%%%%%%%%%%%%%%%%%%%%%%%% FOr redhat9, Is it possible to updat gcc? Thanks, Xinan Li.Long at isb-sib.ch wrote: >This gcc is VERY old, we saw some problems in template handling with >different version of g++. > >I would suggest to try a newer version of g++ and see what happens. > >Li > > > > >>and, >> >>[root at yxnlinux get...

...ux getBioC2.5-R2.5.1]# ls -al /usr/local/lib/R/library/RBGL/libs/ total 17364 drwxr-xr-x 2 root root 4096 Dec 23 2005 . drwxr-xr-x 17 root root 4096 Dec 23 2005 .. -rwxr-xr-x 1 root root 17743886 Dec 23 2005 RBGL.so Please help me to fix it. THanks, xinan

...SHLIB_CFLAGS = SHLIB_CXXFLAGS = SHLIB_CXXLD = g++ SHLIB_CXXLDFLAGS = -shared SHLIB_EXT = .so SHLIB_FCLD = g77 SHLIB_FCLDFLAGS = -shared SHLIB_FFLAGS = SHLIB_LD = gcc -std=gnu99 SHLIB_LDFLAGS = -shared SHLIB_LIBADD = SHLIB_LINK = $(SHLIB_LD) $(SHLIB_LDFLAGS) $(LDFLAGS) what should I do? thanks, xinan

...045455 [3,] 2.469565 1.6111111 [4,] 2.421053 0.7529412 > rowMeans(fc.perSample) [1] 1.818966 1.590078 2.040338 1.586997 But if you manually check every gene one by one, totally different results were got. for example: > mean(2.471264, 1.1666667) [1] 2.471264 Many thanks for any help. Xinan