search for: xild

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2015 Sep 29
2
Build R with MKL and ICC
On Wed, Sep 9, 2015 at 11:26 PM, Nathan Kurz <nate at verse.com> wrote: > > As a short and simple approach, I just compiled the current R release > on Ubuntu with ICC and MKL using just this: > > $ tar -xzf R-3.2.2.tar.gz > $ cd R-3.2.2 > $ CC=icc CXX=icpc AR=xiar LD=xild CFLAGS="-g -O3 -xHost" CXXFLAGS="-g > -O3 -xHost" ./configure --with-blas="-lmkl_rt -lpthread" --with-lapack > --enable-memory-profiling --enable-R-shlib > $ make > $ sudo make install > $ R --version > R version 3.2.2 (2015-08-14) -- "Fire Safet...
2015 Sep 07
2
Build R with MKL and ICC
...lp64 > >> > -lmkl_intel_thread -lmkl_core -liomp5 -lpthread" > >> > export CC="icc" > >> > export F77="ifort" > >> > export CXX="icpc" > >> > export AR="xiar" > >> > export LD="xild" > >> > export CFLAGS="-O3 -ipo -openmp -parallel -xAVX" > >> > export CXXFLAGS="-O3 -ipo -openmp -parallel -xAVX" > >> > export FFLAGS="-O3 -ipo -openmp -parallel -xAVX" > >> > export MAIN_LDFLAGS='-openmp'...
2015 Sep 30
1
Build R with MKL and ICC
...bpath=/opt/intel/compilers_and_lbraries_2016.0.109/linux/compiler/lib/intel64/ _mkllibpath=${MKLROOT}/lib/intel64/ _omp_lib=/opt/intel/lib/intel64/ MKL=" -L${_mkllibpath} -lmkl_rt -lpthread" export CC="icc" export CXX="icpc" export AR="xiar" export LD="xild" export F77="ifort" export CFLAGS="-g -O3 -xHost -I${MKLROOT}/include" export CXXFLAGS="-g -O3 -xHost -I${MKLROOT}/include" export FFLAGS="-I${MKLROOT}/include" export FCFLAGS="-I${MKLROOT}/include" # shared libs ./configure --with-blas=&quot...
2017 Apr 21
1
Intel MKL compiling issue
...export ICC_OPT="-mkl -xHOST -fp-model strict" export CC="icc $ICC_OPT" export CXX="icpc $ICC_OPT" export FC="ifort -mkl -xHOST" export F77="ifort -mkl -xHOST" export FPICFLAGS=" -fPIC" export AR=xiar export LD=xild export MKL="-lmkl_gf_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread" ./configure --with-x=no --with-blas=-lmkl
2015 Sep 04
2
Build R with MKL and ICC
...L="-L${_mkllibpath} -L${_icclibpath} -lmkl_intel_lp64 > > -lmkl_intel_thread -lmkl_core -liomp5 -lpthread" > > export CC="icc" > > export F77="ifort" > > export CXX="icpc" > > export AR="xiar" > > export LD="xild" > > export CFLAGS="-O3 -ipo -openmp -parallel -xAVX" > > export CXXFLAGS="-O3 -ipo -openmp -parallel -xAVX" > > export FFLAGS="-O3 -ipo -openmp -parallel -xAVX" > > export MAIN_LDFLAGS='-openmp' > > ./configure --with-lapack...
2015 Sep 02
4
Build R with MKL and ICC
...port LD_LIBRARY_PATH=${_mkllibpath}:${_icclibpath} export MKL="-L${_mkllibpath} -L${_icclibpath} -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread" export CC="icc" export F77="ifort" export CXX="icpc" export AR="xiar" export LD="xild" export CFLAGS="-O3 -ipo -openmp -parallel -xAVX" export CXXFLAGS="-O3 -ipo -openmp -parallel -xAVX" export FFLAGS="-O3 -ipo -openmp -parallel -xAVX" export MAIN_LDFLAGS='-openmp' ./configure --with-lapack --with-blas="$MKL" --enable-R-shlib --en...
2020 Jun 24
5
R 4.0.1-4.0.2 built with Intel Composer 19.0-19.1.1, error in "make check" on CentOS 7.7
...elf is successful). I built R 4.0.2 with the Intel Parallel Studio XE compiler suite, versions 19.0.x to 19.1.1. Build seems to go fine. I built it like this: module purge module load intel/19.1.1 module list export CC=icc export CXX=icpc export F77=ifort export FC=ifort export AR=xiar export LD=xild export CFLAGS="-O3 -ipo -qopenmp -axAVX,CORE-AVX2,CORE-AVX512" export F77FLAGS="-O3 -ipo -qopenmp -axAVX,CORE-AVX2,CORE-AVX512" export FFLAGS="-O3 -ipo -qopenmp -axAVX,CORE-AVX2,CORE-AVX512" export CXXFLAGS="-O3 -ipo -qopenmp -axAVX,CORE-AVX2,CORE-AVX512" ex...
2015 Sep 29
0
Build R with MKL and ICC
...11:26 PM, Nathan Kurz <nate at verse.com> wrote: >> >> As a short and simple approach, I just compiled the current R release >> on Ubuntu with ICC and MKL using just this: >> >> $ tar -xzf R-3.2.2.tar.gz >> $ cd R-3.2.2 >> $ CC=icc CXX=icpc AR=xiar LD=xild CFLAGS="-g -O3 -xHost" CXXFLAGS="-g >> -O3 -xHost" ./configure --with-blas="-lmkl_rt -lpthread" --with-lapack >> --enable-memory-profiling --enable-R-shlib >> $ make >> $ sudo make install >> $ R --version >> R version 3.2.2 (2015-08...
2020 Jun 25
0
R 4.0.1-4.0.2 built with Intel Composer 19.0-19.1.1, error in "make check" on CentOS 7.7
...arallel Studio XE compiler suite, versions 19.0.x to 19.1.1. Build seems to go fine. I built it like this: > > module purge > module load intel/19.1.1 > module list > > export CC=icc > export CXX=icpc > export F77=ifort > export FC=ifort > export AR=xiar > export LD=xild > > export CFLAGS="-O3 -ipo -qopenmp -axAVX,CORE-AVX2,CORE-AVX512" > export F77FLAGS="-O3 -ipo -qopenmp -axAVX,CORE-AVX2,CORE-AVX512" > export FFLAGS="-O3 -ipo -qopenmp -axAVX,CORE-AVX2,CORE-AVX512" > export CXXFLAGS="-O3 -ipo -qopenmp -axAVX,CORE-A...
2015 Sep 02
0
Build R with MKL and ICC
...:${_icclibpath} > export MKL="-L${_mkllibpath} -L${_icclibpath} -lmkl_intel_lp64 > -lmkl_intel_thread -lmkl_core -liomp5 -lpthread" > export CC="icc" > export F77="ifort" > export CXX="icpc" > export AR="xiar" > export LD="xild" > export CFLAGS="-O3 -ipo -openmp -parallel -xAVX" > export CXXFLAGS="-O3 -ipo -openmp -parallel -xAVX" > export FFLAGS="-O3 -ipo -openmp -parallel -xAVX" > export MAIN_LDFLAGS='-openmp' > ./configure --with-lapack --with-blas="$MKL&qu...
2015 Sep 05
0
Build R with MKL and ICC
...-L${_icclibpath} -lmkl_intel_lp64 >> > -lmkl_intel_thread -lmkl_core -liomp5 -lpthread" >> > export CC="icc" >> > export F77="ifort" >> > export CXX="icpc" >> > export AR="xiar" >> > export LD="xild" >> > export CFLAGS="-O3 -ipo -openmp -parallel -xAVX" >> > export CXXFLAGS="-O3 -ipo -openmp -parallel -xAVX" >> > export FFLAGS="-O3 -ipo -openmp -parallel -xAVX" >> > export MAIN_LDFLAGS='-openmp' >> > ./conf...
2013 Jun 07
1
cannot load pbdMPI package after compilation
Hello, I try to install pbdMPI. Compilation successful, but load fails with segfault. Is anyone can help me? R version 3.0.0 pbdMPI version 0.1-6 Intel compiler version 13.1.1 OpenMPI version 1.6.4-1 CPU Intel x86_64 # R CMD INSTALL pbdMPI_0.1-6.tar.gz .. .... checking for gcc... icc -std=gnu99 checking whether the C compiler works... yes checking for C compiler default output file name...