Displaying 1 result from an estimated 1 matches for "worldprsenv".
2013 Apr 26
1
NMDS in Vegan: problems in stressplot, best solution
...arth.dis, pch=1, p.col="gray")
Why cannot I define both line and point at the same time?
If I have 100 iterations for metaMDS, then when I plot the result, does it
give me result from best solution? How do I know that. Can you plot the
Stress by Iteration number?
parth.mds <- metaMDS(WorldPRSenv, distance = "bray", k = 2, trymax = 100,
engine = c("monoMDS", "isoMDS"),
autotransform =TRUE, wascores = TRUE, expand = TRUE, trace = 2)
plot(parth.mds, type = "p")
Thanks in advance,
Kumar
--
Section of Integrative Biology
University of Texas at Austin...