search for: wolski

...df But instead to get a build package i am getting (see below). At first glance it seems to me that i understand the output. At something similar i am looking most of my time. But it does not help to get the package checked and installed. Is there anyone out who can help me? Please help! D:\home\wolski\Rproject>Rcmd check --no-latex --library=D:\home\wolski\Rproject\temp D:\home\wolski\Rproject\mscalib * using log directory 'D:/home/wolski/Rproject/mscalib.Rcheck' make: Entering directory `/cygdrive/d/prog/R/rw1051/src/gnuwin32' make DLLNM= FLIBS="-lg2c -lRblas" \ -C...

...nches and 380 members total, at height 2514.513 plot(hresd,leaflab="none") #<-error here. #the plotted dendrogram is incomplete. The x axis is not drawn. #The interested reader can download the save(hresd,file="hres.rda") #from the following loacation www.molgen.mpg.de/~wolski/hres.rda Yours /E --please do not edit the information below-- Version: platform = i386-pc-mingw32 arch = i386 os = mingw32 system = i386, mingw32 status = Patched major = 2 minor = 0.0 year = 2004 month = 10 day = 04 language = R Windows XP Professional (build 2600) Service Pack...

...am installing R in non standard directory. ./configure --prefix=/non/standard/directory The installation works fine. But after starting R i get .libPaths() /usr/lib/R/library but they cant be there of course! Have I to set some additional switches during config? Eryk Dipl. bio-chem. Eryk Witold Wolski @ MPI-Moleculare Genetic Ihnestrasse 63-73 14195 Berlin 'v' tel: 0049-30-84131469 / \ mail: wolski@molgen.mpg.de ---W-W---- http://www.molgen.mpg.de/~wolski [[alternative HTML version deleted]]

hello I am returning to some libraries that I had previously customised by amongst other things adding additional functions. I had simply typed these new functions into the file in library/R/thelibrary. These however do not seem to be loaded now as they previously were under older versions of R. What's changed and what do i need to do? Thanks Stephen

Hi! I have installed the new R on windows. I wanted to reinstall the XML package. I am not able to find the XML.zip anymore. I am quite shure that they where a windows binary version. Has anyone old XML windows binary? Eryk Dipl. bio-chem. Eryk Witold Wolski @ MPI-MG Dep. Vertebrate Genomics Ihnestrasse 73 14195 Berlin 'v' tel: 0049-30-84131285 / \ mail: wolski@molgen.mpg.de ---W-W---- [[alternative HTML version deleted]]

...on (..., deparse.level = 1) { which works only for objects of class Myclass Is it possible to use something like setMethod("rbind",signature(...="Myclass",deparse.level="numeric") This gives an error. Or should I use rbind.Myclass Eryk. Dipl. bio-chem. Eryk Witold Wolski @ MPI-Moleculare Genetic Ihnestrasse 63-73 14195 Berlin 'v' tel: 0049-30-83875219 / \ mail: wolski at molgen.mpg.de ---W-W---- http://www.molgen.mpg.de/~wolski

...mon) in one graphics device by setting par(mfrwo=c(2,1)) which does not work. Is there a way to force levelplot to use only a half of the graphic device? Is there a function like image which provides the color scale and is working with par(mfrow, mfcol....? Eryk Dipl. bio-chem. Eryk Witold Wolski @ MPI-Moleculare Genetic Ihnestrasse 63-73 14195 Berlin 'v' tel: 0049-30-83875219 / \ mail: wolski at molgen.mpg.de ---W-W---- http://www.molgen.mpg.de/~wolski

...y this the .Rmd file, html file and corresponding .R files is being placed into the inst/doc directory. However, when I did want to check the package by running devtools::check(build_args="--no-build-vignettes") The following warning is shown: Warning: parse error in file 'C:/Users/wolski/AppData/Local/Temp/Rtmp4QanHv/SRMService.Rcheck/SRMService/doc/tr_srm_summary.R': /Users/wolski/AppData/Local/Temp/Rtmp4QanHv/SRMService.Rcheck/SRMService/doc/tr_srm_summary.R:2:22: unexpected '<' 1: params <- 2: list(configuration = < This is how the start of the .R file prod...

...se package and they are not generic. I am right in that if they would be generic then i still can use the neat names with my objects? I have the impression that there are more and more packages are going to be developed. How this is going to be handled in future? Eryk. Dipl. bio-chem. Eryk Witold Wolski @ MPI-MG Dep. Vertebrate Genomics Ihnestrasse 73 14195 Berlin 'v' tel: 0049-30-84131285 / \ mail: wolski@molgen.mpg.de ---W-W---- [[alternative HTML version deleted]]

...es! I am out of ideas now! Can anyone give me a hint? (is there a mailing list for R-Ms Windows?) Sinerely Eryk -- _ _ \|/ \|/ ?v? 'v? 'v' //| |\\ //| |\\ //| |\\ ----m-m-----m-m-----m-m--------w-w----- \\| |// Eryk Witold Wolski .^. /|\ wolski at molen.mpg.de tel : 0049-(0)30-8413-1543 fax : 0049-(0)30-8413-1139 mobile : 0049-1793210931 http://www.molgen.mpg.de/~mass-spec http://www.molgen.mpg.de/~wolski -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-....

...initialize function. So I also can't do something like initialize = function(aminoAcids=bibliospec::AminoAcids){ I guess this is an R FEATURE. But then where and how is the best practice to initialize class members with default values? Thank you. On 12 December 2016 at 15:45, Witold E Wolski <wewolski at gmail.com> wrote: > I am wrting a package called bibliospec. > I have a dataset in data/AminoAcids.tsv and would like to be able to > access it with > > bibliospec::AminoAcids > > from within my package code. > > R CMD build gives me the error: > Err...

Hi! How to generate a empty string of a precise length without using a loop? I need a empty string (char **) to pass it with .C function to a c dll. The c routine writes the result into the string. Eryk. Dipl. bio-chem. Eryk Witold Wolski @ MPI-MG Dep. Vertebrate Genomics Ihnestrasse 73 14195 Berlin 'v' tel: 0049-30-84131285 / \ mail: wolski@molgen.mpg.de ---W-W---- http://www.molgen.mpg.de/~wolski [[alternative HTML version deleted]]

...trix (e.g. 0), but most of the other distances are in the range 1e10+-5000. I would like to show the tree only for the height of 1e10+-5000 but unfortunately their are no parameter like xlim,ylim in the function? Are there other ways to ZOOM? Any suggestions? /E -- Dipl. bio-chem. Witold Eryk Wolski MPI-Moleculare Genetic Ihnestrasse 63-73 14195 Berlin tel: 0049-30-83875219 __("< _ http://www.molgen.mpg.de/~wolski \__/ 'v' http://r4proteomics.sourceforge.net || / \ mail: witek96 at users.sourceforge.net ^^ m m wolski at molgen.mpg...

...;-c(0.1,NaN,0.2,NaN) #or data frame x<-na.omit(y) take some columns from x and do some computation with functions which do not allow NaN 's. After the computing add NaN's at positions stored in attr(x,"na.action") of the result vector. /E -- Dipl. bio-chem. Witold Eryk Wolski MPI-Moleculare Genetic Ihnestrasse 63-73 14195 Berlin tel: 0049-30-83875219 __("< _ http://www.molgen.mpg.de/~wolski \__/ 'v' http://r4proteomics.sourceforge.net || / \ mail: witek96 at users.sourceforge.net ^^ m m wolski at molgen.mpg...

...tistical Computing Version 2.0.0 beta (2004-09-20), ISBN 3-900051-07-0 Some addtitional info about Npatrick1 > is(Npatrick1) [1] "Massvectorlist" "Mlist" "List" "list" [5] "vector" /E Dipl. bio-chem. Witold Eryk Wolski @ MPI-Moleculare Genetic Ihnestrasse 63-73 14195 Berlin 'v' tel: 0049-30-83875219 / \ mail: witek96@users.sourceforge.net ---W-W---- http://www.molgen.mpg.de/~wolski wolski@molgen.mpg.de

...:37, Paul Johnson <pauljohn32 at gmail.com> wrote: > > Greetings. > Is it possible that Onedrive is causing trouble? Do other packages you build and install work well from that directory? > > Paul Johnson > University of Kansas > > On Wed, Oct 3, 2018, 3:13 AM Witold E Wolski <wewolski at gmail.com> wrote: >> >> Hello, >> >> I am trying to install a package with some src files on windows (linux >> install works fine). The sources seem to build, there is an *.dll in >> the src folder but than the installation process fails with:...

...tion. I placed they names as aliases in the file nameofmypackage-internal.Rd as advised. After R CMD check (which runs neatly) they are still listed in 00Index.html. Is there no way to hide internal functions from the doc? Have I overlook something? Sincerely Eryk. Dipl. bio-chem. Eryk Witold Wolski @ MPI-Moleculare Genetic Ihnestrasse 63-73 14195 Berlin 'v' tel: 0049-30-83875219 / \ mail: wolski at molgen.mpg.de ---W-W---- http://www.molgen.mpg.de/~wolski

...lt is defined than on the R prompt it type >silhouette.default Error: Object "silhouette.default" not found R1.9.0 The same error are at R1.8.1 And I knew that a function silhoutte.default are present. But the same piece of code works in R1.6.2 ??? Eryk Dipl. bio-chem. Eryk Witold Wolski @ MPI-Moleculare Genetic Ihnestrasse 63-73 14195 Berlin 'v' tel: 0049-30-83875219 / \ mail: wolski at molgen.mpg.de ---W-W---- http://www.molgen.mpg.de/~wolski

...eate a valid R script when your vignette contains `params` that uses environment values. Most other types of values should be fine. Regards, Yihui -- https://yihui.name On Mon, Jul 9, 2018 at 10:37 AM, Duncan Murdoch <murdoch.duncan at gmail.com> wrote: > On 09/07/2018 8:49 AM, Witold E Wolski wrote: >> >> Dear Duncan, >> >> Following your advice (Thank you for it) I did include into the vignettes >> params: >> configuration: !r get(data(sample_analysis)) >> data: !r get(data(skylineconfig)) >> >> And everything seemed (see belo...

Hello, I have a package which includes some parameterized r-markdown report which I would also like to build as package vignettes. Is there a way to run the parameterized vignette creation with the package build or package check? Thank you -- Witold Eryk Wolski