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wellcome
2017 Oct 15
1
Populate one data frame with values from another dataframe for rows that match
...et.
@Eric<mailto:ericjberger at gmail.com>?s solution was able to achieve that. Nonetheless, we do appreciate your solution.
Regards
------------------
Kevin Wamae
From: William Dunlap <wdunlap at tibco.com>
Date: Saturday, 14 October 2017 at 20:21
To: Kevin Wamae <KWamae at kemri-wellcome.org>
Cc: Bert Gunter <bgunter.4567 at gmail.com>, Rui Barradas <ruipbarradas at sapo.pt>, R-help <R-help at r-project.org>
Subject: Re: [R] Populate one data frame with values from another dataframe for rows that match
Your example used one distinct studyno in DF1 and one dis...
2017 Oct 14
2
Populate one data frame with values from another dataframe for rows that match
...r @Bert Gunter<mailto:bgunter.4567 at gmail.com>, I tried merge and I faced many challenges. @Rui Barradas<mailto:ruipbarradas at sapo.pt> solution is working.
From: Bert Gunter <bgunter.4567 at gmail.com>
Date: Friday, 13 October 2017 at 22:44
To: Kevin Wamae <KWamae at kemri-wellcome.org>
Cc: R-help <R-help at r-project.org>
Subject: Re: [R] Populate one data frame with values from another dataframe for rows that match
?merge
Bert
On Oct 13, 2017 12:09 PM, "Kevin Wamae" <KWamae at kemri-wellcome.org<mailto:KWamae at kemri-wellcome.org>> wrote:...
2017 Oct 14
0
Populate one data frame with values from another dataframe for rows that match
...103
6 J931/6 2016-11-30 3 2016 104
Now your problem is to combine the columns pf_mcl.raw and pf_mcl.curated in
the way you want. ifelse() may be useful for that.
Bill Dunlap
TIBCO Software
wdunlap tibco.com
On Fri, Oct 13, 2017 at 10:48 PM, Kevin Wamae <KWamae at kemri-wellcome.org>
wrote:
> Dear @Bert Gunter<mailto:bgunter.4567 at gmail.com>, I tried merge and I
> faced many challenges. @Rui Barradas<mailto:ruipbarradas at sapo.pt>
> solution is working.
>
> From: Bert Gunter <bgunter.4567 at gmail.com>
> Date: Friday, 13 October...
2017 Oct 13
4
Populate one data frame with values from another dataframe for rows that match
...use of the named recipient. If you have received this e-mail in error, please let us know by replying to the sender, and immediately delete it from your system. Please note, that in these circumstances, the use, disclosure, distribution or copying of this information is strictly prohibited. KEMRI-Wellcome Trust Programme cannot accept any responsibility for the accuracy or completeness of this message as it has been transmitted over a public network. Although the Programme has taken reasonable precautions to ensure no viruses are present in emails, it cannot accept responsibility for any loss or d...
2017 Oct 13
0
Populate one data frame with values from another dataframe for rows that match
?merge
Bert
On Oct 13, 2017 12:09 PM, "Kevin Wamae" <KWamae at kemri-wellcome.org> wrote:
> I'm trying to populate the column ?pf_mcl? in myDF1 with values from
> myDF2, where rows match based on column "studyno" but the solutions I have
> found so far don't seem to be giving me the desired output.
>
> Below is a snapshot of the data.fra...
2009 Mar 05
3
Dropping rows conditionally
...or, please let us know
by replying to the sender, and immediately delete it from your system.
Please note, that in these circumstances, the use, disclosure,
distribution or copying of this information is strictly prohibited. We
apologize for any inconvenience that may have been caused to you.
KEMRI-Wellcome Trust Programmecannot accept any responsibility for the accuracy
or completeness of this message as it has been transmitted over a public
network. KEMRI-Wellcome Trust Programme reserves the right to monitor all incoming and
outgoing email traffic. Although the Programme has taken reasonable
preca...
2017 Oct 14
2
Populate one data frame with values from another dataframe for rows that match
...use of the named recipient. If you have received this e-mail in error, please let us know by replying to the sender, and immediately delete it from your system. Please note, that in these circumstances, the use, disclosure, distribution or copying of this information is strictly prohibited. KEMRI-Wellcome Trust Programme cannot accept any responsibility for the accuracy or completeness of this message as it has been transmitted over a public network. Although the Programme has taken reasonable precautions to ensure no viruses are present in emails, it cannot accept responsibility for any loss or d...
2017 Oct 14
0
Populate one data frame with values from another dataframe for rows that match
...16-12-20 6
# 3 J1000/8 2016-11-18 1
# 4 J1000/9 2016-11-22 0
# 5 J1000/9 2016-11-30 0
# 6 J1000/9 2016-12-09 0
Comparing the two results you see that no rows have been dropped in my
approach.
HTH,
Eric
On Sat, Oct 14, 2017 at 8:49 AM, Kevin Wamae <KWamae at kemri-wellcome.org>
wrote:
> Dear @Rui Barradas, thank you for the solution. It works perfectly.
>
>
> On 13/10/2017, 23:35, "Rui Barradas" <ruipbarradas at sapo.pt> wrote:
>
> Hello,
>
> Try the following.
>
>
> myDF1$studyno <- as.character(my...
2010 Apr 27
1
Cairo package failure to load backend
...any
>Cairo(....)
Or
>CairoXXX(...)
Command I get (variations of):
>Error in Cairo(width, height, file, "pdf", pointsize = pointsize, bg =
bg, :
Failed to create Cairo backend!
Can someone suggest a reason/solution please
Cheers
Dan
Daniel Alcock
Malaria Genetics (T112)
Wellcome Trust Sanger Institute
Cambridge
CB10 1SA
UK
+44 (0)1223 834244 ext. 4994
"The most exciting phrase to hear in science, the one that heralds new
discoveries, is not Eureka! But rather, "hmm.... that's funny...." --
Isaac Asimov
--
The Wellcome Trust Sanger Institute is ope...
2018 Feb 22
0
alternative for multiple if_else statements
...t appears, i.e. subscript[1], is
"2013-04-04".
In the filtered data set the first element that appears is "2013-04-05".
I hope that is enough information for you to make further progress from
here.
Best,
Eric
On Thu, Feb 22, 2018 at 1:28 PM, Kevin Wamae <KWamae at kemri-wellcome.org>
wrote:
> Dear Eric, wow, this seems to do the trick. But I have encountered a
> problem.
>
>
>
> I have tested it on the larger dataset and it seems to work on a filtered
> dataset but not on the whole dataset (attached). See below script..
>
>
>
> #load p...
2015 Dec 07
2
Fwd: Functionality of Nmbd at Active Directory mode of Samba4 !
...about mounting \\server\share as disk and risky fo viruses crypting
files.
Also read messages other, who does not work in AirBus.
And more over, it' s your oppinion.
But I see useless of more discussion at atll.
If you want to combine your efforts to help with getting browsing with DC,
you are wellcome.
If not, I don' t understand your reasons of posting messages, additionally,
as I wrote and some others wrote , not only I need such func.
> When you post for mailing I expect you hope some read you. I expect you
expect some of your readers would help you. Taking time to write correctly
wo...
2011 Aug 04
3
persp()
...ascending value x and y values (even if it does not make sense for me) I still get this message:
<- persp(xvector,yvector,zmatrix,theta=-40,phi=30)
Error in persp.default(xvector, yvector, zmatrix, theta = -40, phi = 30) :
increasing 'x' and 'y' values expected
Any help is wellcome. Is there any other better function to draw a flat map (2D), also example of the imput files is wellcome. Thanks in advance.
Rosario
2009 Aug 18
0
unable to load library rJava on my Ubuntu 9.04
...va.so':
libjvm.so ... but It cannot be loaded. What do I do?
Problem 2: I have tried in vain to get the newer R version of 2.9.1. I keep on getting the 2.8.1. I have read the instructions from the R site but I seem not to be there. What do I do?
Kind regards,
Lazarus Mramba,
KEMRI/Wellcome trust research Institute,Kilifi, Kenya
This e-mail (including any attachment to it) contains information
which is confidential. It is intended only for the use of the named
recipient. If you have received this e-mail in error, please let us know
by replying to the sender, and immediately delete it...
2017 Oct 13
0
Populate one data frame with values from another dataframe for rows that match
...use of the named recipient. If you have received this e-mail in error, please let us know by replying to the sender, and immediately delete it from your system. Please note, that in these circumstances, the use, disclosure, distribution or copying of this information is strictly prohibited. KEMRI-Wellcome Trust Programme cannot accept any responsibility for the accuracy or completeness of this message as it has been transmitted over a public network. Although the Programme has taken reasonable precautions to ensure no viruses are present in emails, it cannot accept responsibility for any loss or d...
2015 Jan 15
5
Problems with permissions
...group = users
read only = No
create mask = 0777
directory mask = 0777
On the Windows clients however in Properties -> Security I see only special
rights which lack full access and delete.
How can I get full access to all files and subdirectories.
Any hints for what I configured wrong are wellcome.
greetings
Harry
2007 Nov 22
3
question about extreme value distribution
...Y data.
However, I'm not sure how to do this.
I am wondering is there a way to use the
extreme value distribution functions in R
to test the hypothesis that the maximum of Y
(for a particular X) is correlated with X?
I would appreciate advice very much.
regards
Avril Coghlan
--
The Wellcome Trust Sanger Institute is operated by Genome Research
Limited, a charity registered in England with number 1021457 and a
company registered in England with number 2742969, whose registered
office is 215 Euston Road, London, NW1 2BE.
2006 Jun 12
1
strange behaviour with rotated viewports in grid
...idth=0.9,height=0.9,name="vp1"))
grid.rect()
pushViewport(viewport(width=0.3,height=0.9,angle=0,name="vp2"))
grid.rect()
upViewport()
pushViewport(viewport(width=0.3,height=0.9,angle=10,name="vp3"))
grid.rect()
Dr. Rafael Najmanovich
European Bioinformatics Institute
Wellcome Trust Genome Campus
Cambridge CB10 1SD
United Kingdom
rafael.najmanovich at ebi.ac.uk - www.ebi.ac.uk/~rafi
+44-1223-492599 (voice) +44-7786-968257(mobile) +44-1223-494468 (fax)
2007 Jan 15
0
Advanced course R programming and Bioconductor in Cambridge UK 30.3.+1.4.
Dear R users & developers,
Seth Falcon and Martin Morgan are teaching
Advanced R Programming and Bioconductor 30 March - 1 April 2007 at the
Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.
This two-day course focuses on programming skills required to develop
software for statistical analysis of high-throughput genomic data using
R and Bioconductor. Lectures and practical sessions introduce the
diversity of packages already available for...
2009 Dec 14
0
Online help for text() wrong for 'pos' argument. (PR#14136)
Hello
Please find bug report attached.
Thanks
Matthew
--
Matthew Gillman
Team 105: Variation Informatics
Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK
Tel: 01223 834244 Ext. 4922
--
The Wellcome Trust Sanger Institute is operated by Genome Research
Limited, a charity registered in England with number 1021457 and a
company registered in England with n...
2012 Mar 02
3
subseting a data frame
...09211 133609394
414308 ChrX_133620495_133620560_HPRT1 65 ChrX 133620495 133620560
414373 ChrX_133620495_133620560_HPRT1 65 ChrX 133620495 133620560
414438 ChrX_133620692_133620696_HPRT1 4 ChrX 133620692 133620696
414442 ChrX_133624218_133624235_HPRT1 17 ChrX 133624218 133624235
--
The Wellcome Trust Sanger Institute is operated by Genome Research
Limited, a charity registered in England with number 1021457 and a
company registered in England with number 2742969, whose registered
office is 215 Euston Road, London, NW1 2BE.