Displaying 13 results from an estimated 13 matches for "walltime".
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calltime
2008 Jun 13
16
Isolation and time
(Moving from offlist discussion.)
I''m interested in opinions... Assume there are four
single vcpu domains A, B, C, D, running on a 2-CPU
physical machine. We wish to test for time skew on
domain A. Assuming B, C, and D are all running
some workload that attempts to fully saturate the
(single) cpu.
1) Should the affect on domain A be essentially the
same regardless of what load
2012 Mar 18
1
install R package on Unix cluster
Hi R users,
Working from a PC, I am trying to install the spatstat package on a Unix cluster. I created the following PBS file to send a job array:
#!/bin/bash -ue
#PBS -m ae
#PBS -M my email
#PBS -J 1-45
#PBS -A my username
#PBS -N job name
#PBS -l resources
#PBS -l walltime
cd $PBS_O_WORKDIR
module load R/2.14.1
R CMD INSTALL -l /path/to/library spatstat
R CMD BATCH /path/to/folder/Script_$PBS_ARRAY_INDEX.R
Obviosuly I failed to understand pag 19 of the R admin manual because I keep getting the following error message:
Warning: invalid package ‘spatstat’
Error:...
2010 Oct 11
1
running R script on linux server
...R-users,
I have a problem running my R code on a Linux cluster. What I did was
write a .pbs file to instruct the cluster on what to do and how:
#!/bin/sh
#PBS -m ae
#PBS -M uqlcatta@uq.edu.au
#PBS -A uq-CSER
#PBS -N job1_lollo
#PBS -l select=1:ncpus=1:NodeType=fast:mem=8GB
#PBS -l walltime=999:00:00
cd $PBS_O_WORKDIR
source /usr/share/modules/init/bash
module load R/2.11.1
/home/uqlcatta/script/diag.sh
The .pbs file calls a .sh file, which is located on my home directory on
the cluster, and which contains the R script (enclosed in " ") to run
#!/b...
2006 Sep 26
3
S4 accessors
...iostat.ucsf.edu
Dept of Epidemiology and Biostatistics fax: (415) 514-8150
University of California, San Francisco
San Francisco, CA 94107-1739 hm: (415) 550-1062
-------------- next part --------------
\name{runTime-accessors}
\alias{startTime}
\alias{endTime}
\alias{wallTime}
\alias{waitTime}
\alias{cpuTime}
\alias{mpirank}
\alias{mpirank<-}
\alias{remoteTime<-}
\title{ Accessors for runTime class}
\description{
Set and get runTime related information.
}
\usage{
startTime(runTime)
endTime(runTime)
wallTime(runTime)
waitTime(runTime)
cpuTime(runTime)
mpirank(run...
2007 Jul 30
1
random number generator in batch jobs
...pt file "do_mul"
"
#!/bin/bash
export var
for var in $(seq 1 5)
do
qsub -v var do_test
done
exit 0
"
Through "do_mul", 5 "do_test" script files are submitted to the cluster.
The script file "do_test":
"
#!/bin/bash -l
#PBS -l ncpus=1
#PBS -l walltime=0:05:00
cd $PBS_O_WORKDIR
mkdir test$var
cd test$var
module load R/2.5.0
R --vanilla< test
exit 0
"
The content in R file "test" is :
"rm(list=ls(all=TRUE))
sample(10)
"
I expect to have different samples each time. However, for these 5
replications, the first 3 jobs g...
2014 Feb 12
2
Help with OpusEnc
Hi all,
New to list and Opus Codec.
I've been using it on a beagleboneblack with 'arecord'.
One of the things I've noticed while encoding is that Opus reports a float with an 'x' along with "realtime".
Where can I look up where this calculation is derived?
It got me looking and I've noticed that when I record something from a known source (in testing)
2013 Feb 05
21
[PATCH] x86/hvm: fix corrupt ACPI PM-Timer during live migration
The value of ACPI PM-Timer may be broken on save unless the timer mode
is delay_for_missed_ticks.
With other timer modes, vcpu->arch.hvm_vcpu.guest_time is always zero
and the adjustment from its value is wrong.
This patch fixes the saved value of ACPI PM-Timer:
- don''t adjust the PM-Timer if vcpu->arch.hvm_vcpu.guest_time is zero.
- consolidate calculations of PM-Timer to one
2011 Feb 03
0
R: mpirun .C and R
...ata")
mpi.quit(save = "no")
----------------------------------------------------------------------------------------------------
eg.sh code
----------------------------------------------------------------------------------------------------
#MSUB -l nodes=1:ppn=1
#MSUB -l walltime=100:00:00
#MSUB -m be
#MSUB -V
#MSUB -o /export/home/example/Runs/eg.out
#MSUB -e /export/home/example/Runs/eg.err
#MSUB -d /export/home/example/Runs
mpirun --mca mpi_warn_on_fork 0 -np 1 /export/home/R-2.12.1/bin/R
--slave -f /export/home/example/Runs/eg.r
echo "DONE multiple run!"
--...
2014 Feb 12
0
Help with OpusEnc
...omputed here:
https://git.xiph.org/?p=opus-tools.git;a=blob;f=src/opusenc.c;h=366893b7af325a67be90b33f991426a2c5665ef9;hb=HEAD#l1030
> The new recording is shorter than the original by significant amounts.
Shorter as in data is missing, or that the playback length doesn't
exactly match the walltime while you were recording? This could be a
couple of different things.
-r
2014 Feb 18
1
Help with OpusEnc (SOLVED - sort of)
...git.xiph.org/?p=opus-tools.git;a=blob;f=src/opusenc.c;h=366893b7af325a67be90b33f991426a2c5665ef9;hb=HEAD#l1030
>
>> The new recording is shorter than the original by significant amounts.
>
> Shorter as in data is missing, or that the playback length doesn't
> exactly match the walltime while you were recording? This could be a
> couple of different things.
Found the source of the problem to this post.
It turns out the TI TLV320AIC3106 (and possibly variants) REALLY wants the PLL registers ALL set.
Currently, the tlv320aic3x.c driver writes out all needed registers, but some...
2016 Apr 10
2
CentOS7, Xen 4.6.1, kernel 3.18.25-19 strange performance problem
Hi all,
i just stumbled over a strange performance issue with my Xen setup.
I use centos-virt Xen since a long time on my workstation and usually
never check performance. However, yesterday I booted into the 3.18.25-19
Dom0 kernel *without* Xen and found the system noticably more
responsive. That triggered me into running a simple kernel compile
benchmark and compare the results:
2005 May 19
1
R 2.1.0 RH Linux Built from Source Segmentation Fault
...ed, 18 May 2005 4:47:19 pm CDT
Subject: PBS JOB 1534.seldon
PBS Job Id: 1534.seldon
Job Name: mnl300_z
Execution terminated
Exit_status=139
resources_used.cpupercent=98
resources_used.cput=00:25:02
resources_used.mem=233536kb
resources_used.ncpus=1
resources_used.vmem=250252kb
resources_used.walltime=00:25:13
===========End of original message text===========
The second source file contains:
rmnlRwMetrop1=function(Data,Prior,Mcmc,beta0)
{
#
# purpose:
# draw from posterior for MNL using Independence Metropolis
#
# Arguments:
# Data - list of m,X,y
# m is number of alternatives
#...
2006 Oct 24
15
How to emit associative array after ^C
Boy am I a dummy. I want to simply dump out unfreed allocations when I terminate the script. What''s the secret sauce?
#!/usr/sbin/dtrace -s
pid$1::MyAlloc:return
{
bufs[arg1] = walltimestamp;
}
pid$1::MyFree:entry
/bufs[arg0]/
{
bufs[arg0] = 0;
}
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