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...g -mcpu=power6 -c gramRd.c -o gramRd.o gcc -maix64 -pthread -std=gnu99 -shared -Wl,-brtl -Wl,-G -Wl,-bexpall -Wl,-bnoentry -lc -L/usr/local/lib -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o -lm -lintl make[6]: Entering directory '/sas/data04/vinh/R-3.2.2/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[6]: Leaving directory '/sas/data04/vinh/R-3.2.2/src/library/tools/src' make[5]: Leaving directory '/sas/data04/vinh/R-3.2.2/src/library/tools/src' make[4]: Leaving directory '/sas/data04/vinh/...

Please note that if I don't specify those variables, then R 32 bit compiles fine. Thanks. -- Vinh On Thu, Oct 8, 2015 at 6:50 PM, Vinh Nguyen <vinhdizzo at gmail.com> wrote: > Dear list, > > I'm following the instructions provided here to compile R 64 bit on > AIX 6.1. I did > > export OBJECT_MODE=64 > export CC="gcc -maix64 -pthread" > export CXX=...

One other note: I'm also using the latest src/main/dcf.c that was giving an issue on AIX previously; see [this](https://stat.ethz.ch/pipermail/r-devel/2015-September/071781.html) thread. Thanks. On Thu, Oct 8, 2015 at 6:51 PM, Vinh Nguyen <vinhdizzo at gmail.com> wrote: > Please note that if I don't specify those variables, then R 32 bit > compiles fine. Thanks. > > -- Vinh

...nt on a whim and copied src/main/dcf.c from R 2.15.3 over to 3.2.2, and R compiled fine and install.packages now work for me. This is probably not ideal, but it at least makes R usable on AIX for me. Would definitely like to help figure out what's wrong with the new dcf.c on AIX. Thanks. -- Vinh On Mon, Sep 21, 2015 at 10:01 AM, Vinh Nguyen <vinhdizzo at gmail.com> wrote: > Hi there, > > I just wanted to follow up on this readDCF issue with install.packages > on AIX on R 3.*. I'm happy to help try potential solutions or debug > if anyone could point me in the ri...

...es a new buffer for each line in the DCF file. So we got support for arbitrary long lines (a rare situation) at the price of a slow down and increased memory usage for all DCF files. Sounds less than optimal :-/ Cheers, H. On 09/21/2015 11:01 AM, Duncan Murdoch wrote: > On 21/09/2015 1:49 PM, Vinh Nguyen wrote: >> Here's an update: >> >> I checked the ChangeLog for R, and it seems like readDCF was changed >> in 3.0.2. I went on a whim and copied src/main/dcf.c from R 2.15.3 >> over to 3.2.2, and R compiled fine and install.packages now work for >> me....

>>>>> Vinh Nguyen <vinhdizzo at gmail.com> >>>>> on Thu, 8 Oct 2015 20:21:32 -0700 writes: > Ahh, sorry for not googling the error message. Found > [this](http://r.789695.n4.nabble.com/Error-compiling-R-2-10-1-on-AIX-td1017862.html) > post that suggests modifyin...

Dear list (re-posting from r-help as r-devel is probably more appropriate), I was able to successfully compile R on our AIX box at work using the GNU compilers following the instructions on the R Administration guide. The output can be seen at here (https://gist.github.com/nguyenvinh/504321ea9c89d8919bef) and yields no errors . However, I get a segfault whenever I try to use the install.packages function to install packages. Using debug, I was able to trace it to the readDCF function: Browse[2]> debug: if (!all) return(.Internal(readDCF(file, fields, keep.white))) Browse[...

On 21/09/2015 1:49 PM, Vinh Nguyen wrote: > Here's an update: > > I checked the ChangeLog for R, and it seems like readDCF was changed > in 3.0.2. I went on a whim and copied src/main/dcf.c from R 2.15.3 > over to 3.2.2, and R compiled fine and install.packages now work for > me. > > This is pro...

...essage, /usr/bin/install: cannot create regular file `../../include/32/Rconfig.h': No such file or directory I realize I am misunderstanding the instructions. Could someone please clarify how I could go about compiling both 32-bit and 64-bit versions of R on my Linux machine? Thank you! -- Vinh

...e. So we got support for arbitrary long lines (a rare > situation) at the price of a slow down and increased memory usage for > all DCF files. Sounds less than optimal :-/ > > Cheers, > H. > > > On 09/21/2015 11:01 AM, Duncan Murdoch wrote: >> On 21/09/2015 1:49 PM, Vinh Nguyen wrote: >>> Here's an update: >>> >>> I checked the ChangeLog for R, and it seems like readDCF was changed >>> in 3.0.2. I went on a whim and copied src/main/dcf.c from R 2.15.3 >>> over to 3.2.2, and R compiled fine and install.packages now w...

--- On Thu, 3/9/09, Vinh Nguyen <vinhdizzo at gmail.com> wrote: > hi hin-tak, > > i'm trying to build r packages for windows on a > mac/linux. i guess > this used to possible and supported, but is no longer > supported. i > ran into this post of yours, > https://stat.ethz.ch/pipermail/...

...pdate the main R source file? I'm assuming the former since we're using version control. 2. What is your process for updating and testing your code? Do you run checks, build, and re-install the package to test? Or do you have some fancy workflow? Please share. Thanks for your advice. Vinh -- Vinh Nguyen Department of Statistics Donald Bren School of ICS 2231 Bren Hall University of California, Irvine Irvine, CA 92607 vqnguyen at uci.edu | http://www.ics.uci.edu/~vqnguyen/ Schedule a meeting: http://tungle.me/VinhNguyen

...se="") > writeLines(dcf, "test.dcf") > nchar(read.dcf("test.dcf")) aa [1,] 8186 Here's what I see in the file: $ wc -c test.dcf 10005 test.dcf Same results using Revolution R Open on Windows. Also same results on regular R 3.2.0 on Windows. -- Vinh

...ll.packages on AIX on R 3.*. I'm happy to help try potential solutions or debug if anyone could point me in the right direction. To re-cap, it appears readDCF is segfault'ing since R 3.* on AIX. This was not the case up until R 2.15.3. This makes install.packages not usable. Thanks. -- Vinh On Tue, Nov 11, 2014 at 10:23 AM, Vinh Nguyen <vinhdizzo at gmail.com> wrote: > Dear list (re-posting from r-help as r-devel is probably more appropriate), > > I was able to successfully compile R on our AIX box at work using the > GNU compilers following the instructions on the...

...Just tried the latest dcf.c from R-dev and install.packages no longer segfaults from readDCF. Thank you both Duncan and Murdoch for your help. Can finally make use of this AIX box now (fyi placed request to get gdb installed but who knows when that would've been installed). Thanks again. -- Vinh

> -----Urspr?ngliche Nachricht----- > Von: roxygen-devel-bounces at lists.r-forge.r-project.org [mailto:roxygen- > devel-bounces at lists.r-forge.r-project.org] Im Auftrag von Vinh Nguyen > Gesendet: Donnerstag, 4. November 2010 04:04 > An: roxygen-devel at r-forge.wu-wien.ac.at > Betreff: Re: [Roxygen-devel] Roxygen: @example tag does not work for me > > Try @examples (with an 's'): > > #' @examples > #' my R code > #' my R co...

...math symbols are "standard default fonts". I ask because I have "mu" in a pdf generated by R. The file displays fine in xpdf, but I get a different symbol when viewed with evince. Not sure whether it's a font issue or it's an evince issue. Thank you for your time. -- Vinh

...lta1) ~ treatment1 + teatment2 + surrogate2 + strata(id) ? >From here, I can obtain the variance and covariance terms for the coefficients of treatment1 and treatment2. Is this the same as fitting 2 separate models but also obtaining the covariances of the two estimates? Let me know, thanks. Vinh

...ong? is my as.character() used wrong here? i know R uses fortran code for lm. but suppose i wanted to do regression in C/C++. is this lapack method the recommended / "best practice" route? i just want to know whats the recommended method for doing matrix manipulations in C. thanks! vinh

...03 x64 as it does not happen on my Windows 7 machine and that I did not find anything when searching for this issue. I thought I'd reach out just in case anyone has any ideas on how to fix it. I'm stuck on Windows Server 2003 because it is a work server. Thanks so much for your help. -- Vinh [[alternative HTML version deleted]]