Displaying 4 results from an estimated 4 matches for "vign_test".
2011 Mar 26
0
rebuilding vignettes in 2.13-0-alpha fails if name of source dir is not package name
...he check.
The log printed to screen during check shows:
....
* checking re-building of vignettes ... NOTE
Error in re-building vignettes:
...
Error in pkgVignettes(package = package, dir = dir, lib.loc = lib.loc) :
directory '/home/gavin/work/R/packages/analogue/analogue_check/pkg.Rcheck/vign_test/analogue' does not exist
Calls: buildVignettes -> pkgVignettes
Execution halted
* checking PDF version of manual ... OK
The entire log is appended below the sessionInfo() output.
If I look in the directory where I am checking the package, I have
pkg.Rcheck and inside the I have vign_test....
2012 Apr 30
0
R CMD check . segfault on re-building vignettes
...g ...
Segmentation fault (core dumped)
as one can see, the error stems from the call
file.copy(pkgdir, vd2, recursive = TRUE)
in the run_vignettes function defined in the tools:::.check_packages
function. this call will copy the contents of "pkgdir" (the source
directory) to the ..Rcheck/vign_test/ directory _recursively_, the
problem of which being that the "..Rcheck" directory is part of
"pkgdir". Thus we get into a loop of copying pkgdir into
pkgdir/..Rcheck/vign_test, which is interrupted at some point by a
segfault (at least on my x86_64 GNU/Linux machine running Ubu...
2012 Apr 30
0
file.copy(src, src, recursive=TRUE) causes a segfault (Was: Re: R CMD check . segfault on re-building vignettes)
...e dumped)
>
> as one can see, the error stems from the call
> file.copy(pkgdir, vd2, recursive = TRUE)
> in the run_vignettes function defined in the tools:::.check_packages
> function. this call will copy the contents of "pkgdir" (the source
> directory) to the ..Rcheck/vign_test/ directory _recursively_, the
> problem of which being that the "..Rcheck" directory is part of
> "pkgdir". Thus we get into a loop of copying pkgdir into
> pkgdir/..Rcheck/vign_test, which is interrupted at some point by a
> segfault (at least on my x86_64 GNU/Linux...
2012 May 14
1
Vignette problem
...atex/pdftex-def/pdftex.def:414: Emergency
stop.
...
l.414 }\@ehc
No pages of output.
Transcript written on lmekin.log.
/usr/bin/texi2dvi: latex exited with bad status, quitting.
make: *** [lmekin.pdf] Error 1
Error in buildVignettes(dir =
"/home/therneau/research/surv/Hg/coxme.Rcheck/vign_test/coxme") :
running 'make' failed
Execution halted
-----------------------------------------
The resulting .tex file work just fine with pdflatex, however. I
haven't found any reference to this elsewhere, but my guess is that it
is something simple that I've missed.
Terr...