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2010 Jul 12
3
Multiple Ploting Colors
I'm trying to use multiple plotting colors in my code. My first "ifelse" statement successfully does what I want. However, now I want anything less than -4.5 to be green and the rest black. I want another "col" argument but can only use one. How could I go about getting separate colors for anything above 4.5 and less than -4.5?
plot(three, type="h",
2012 May 04
0
LIMMA decideTests result zero from contrast matrix
...2 <- eBayes(fit2)
> tTUni<- topTable(fitUni, adjust="fdr", sort.by="B", number=numGenes)
> results <- decideTests(fit2)
> vennDiagram(results,include=c("up","down"),counts.col=c("red","green"))
## ### I get zero genes for upregulation and downregulation #####
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