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2009 Nov 05
0
nested factorial effects in a lme model
...ct (random effect) nested within Species Temperature (fixed effect with 2 levels) nested within Subject, crossed with Fatigue Fatigue (fixed effect with 2 levels) nested within Subject, crossed with Temperature So, using the lme function, the model should look something like this: z <- lme(Umaxcm ~ Species*Temp*Fatigue, random= ~ 1 | Lake/Species/Sub/ (Temp*Fatigue)) The problem is how to specify that the Temp*Fatigue factorial treatments are nested within Subject (each subject was tested at both temperatures at both fatigue levels). Using the above formula is not correct (it gives...