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totalmean
2011 Oct 06
0
TCGA expression data: plotting ....
...1A-02R-0821-07__gene_expression_analysis.txt",
> header=T, row.names=1)
in all cases I get the error
"more columns than column names"
I have only been able to read in the level II data with the code:
> dat2<-read.table("C:\\US82800149_251976011000_S01_GE2_105_Dec08.txt_lmean.out.logratio.probe.tcga_level2.data.txt",header
> = TRUE, as.is = TRUE, sep="\t")
So this is what I am working with.
I can see that the dimensions of this data are
> dim(dat2)
[1] 90798 2
When I print "dat2" to the screen it looks like this:
I assume that thi...