search for: turchin

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2004 Mar 03
1
partial autocorrelation for Rt vs. Nt-1, ......., Nt-h
...on of population density at time t against lagged population density. However, what we are trying to calculate is the partial correlation between rate of population change, Rt=log Nt/Nt-1, against lagged population densities. Which is the partial rate correlation function propsed by Berryman & Turchin (1999). The list archives give show methods for estimating partial correlation for 2 or 3 variables only. Could any list member please suggest how this could be done for more variables, say Nt-1 to Nt-10. Thank you, Scott ============================================= Hello Tomas! There are func...
2011 Apr 20
1
What to do with positive likelihoods
..., now that my variances are so small? Using pnorm instead returns my data to what's expected, but my understanding is that pnorm gets me a probability now, not a likelihood. Could I use the output from pnorm in a likelihood ratio test (which was my original plan)? Thanks for any help, ~Michael Turchin Children's Hospital Boston
2010 Mar 11
1
Append to outfile in R CMD BATCH mode
Is there a way to append to the outfile when using R CMD BATCH? My code, right now, is: R CMD BATCH --slave --vanilla '--args place .2 -.1 .9 .6' StratificationSimulation example.output Everything else is working the way I'd like it. The first few lines of code of my script file are: options(echo=FALSE) cmd_args = commandArgs() print (cmd_args) #d <-
2010 Feb 05
1
Appending results via for loop
Hey all, So I'm manually conducting a sliding window test, and I would like to tack on results to some variable as the results are outputted. I'm using a for loop, and I am currently using an array as my 'output collector' variable, though I know I should be using a dataframe of some sort. My question is how to properly initialize a dataframe, and then add results to it as I go
2010 Mar 11
1
Searching for option explanations
Hey all, Sorry if this is redundant, but I can't figure out a good search query for either the mailing list, or google, to find an answer to this. Let's say I have a couple of R options I'm interested in learning more about, but their details aren't explained in the command's help file. For example, for R CMD BATCH --help, it discusses the use of --restore, --save and