Displaying 2 results from an estimated 2 matches for "ttta".
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ttt
2013 Feb 03
1
Adding complex new columns to data frame depending on existing column
Hello
I have a data frame as below
V1 V2 V3 V4 V5 V6
chr1 18884 C CAAAA 2 0
chr1 135419 TATACA T 2 0
chr1 332045 T TTG 0 2
chr1 453838 T TAC 2 0
chr1 567652 T TG 1 0
chr1 602541 TTTA T 2 0
on which I want to perform complex rearrangement such that:
if V3 is a string >1 (i.e line 2) then I generate 2 new columns where
first new column = V2-1 & second new column = V2+(length of string in V3)+1
therefore, for line 2 output would look like:
chr1 135419 TATACA...
2010 May 19
1
sample and rearrange
...AA GTCAGAA GTCAGCA ACTAGCA
GM930026 ACTAGAA GAGTGCA GAGTGCA ACTAGAA
GM920031 GATTGCC GTCATCA GATTGCC GATTGCC
GM990105 GATTGCC GATTGCC GTCAGCA GTCAGCA
GM920202 GATTGCC GATTGCC GATTGCC GATTGCC
GM920089 GAGTGCA GTCAGAA ACTATCA GATTGCC
GM980051 ACTAGAA ACTAGAA GATAGCC GATAGCC
GM930109 GTCATCA GAGTGCA GTTTTAA ACTAGAA
GM940039 GTCATCA GAGTGCA GTTTGCC ACTTTCA
GM050099 GAGTGCA GTCAGAA GTTATCC ACTTTCA
GM050099 GAGTGCA GTCAGAA GTTATCC ACTTTCA
GM030005 ACTAGAA GAGTGCA ACTAGAA ACTAGAA
GM050009 ACTAGAA GATTGCC GATTGCC ACTAGAA
GM990027 GATTGCC GAGTGCA GATTGCA GATTGCC
GM990066 GATTGCC GTCATCA GTCATCA GATTGCC