search for: treedist

...0escore are numeric. I wish to extract only those rows from this table where the log10escore is less than -3. data <-read.table(filename); data$log10escore = data$log10escore[ data$log10escore < -3]; I would like to use this pruned list of escores to get the corresponding genomenames and treedist. I did not find anything useful in the FAQs and Notes on R for this part of the data extraction. As I am just beginning programming in R, I would appreciate your input about this. Thanks L ____________________________________________________________________________________ Food fight? Enjoy...

...basic functions have already been established in the package for manipulating trees such as deleting and swapping nodes, rooting and unrooting trees, changing the root of the tree. The package also includes functions such as "consensus", "coaltime, "popsize", "treedist" for summarizing phylogenetic trees, calculating the coalescence time, population size, and tree distance. The function maxtree is built in the package to esimtate the species tree from multiple gene trees. * pooh (0.2) Charles J. Geyer http://crantastic.org/packages/pooh functio...