search for: treeatment

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2006 Jul 28
0
tests performed by anova
...the columns coding for factor b a:b : the removal of the columns coding for the interaction of factors a and b BUT : print(anova(mod)) does not provide the expected results. Moreover, the results of "anova" do not depend on the contrasts, since setting options(contrasts=c("contr.treeatment", "contr.poly")) leads to the same result. I manage to obtain the desired results by creating the submodels without the corresponding columns, and by comparing them with "anova" , for example : xsub = mod$x[,-c(2)] submod = lm(Y ~ xsub-1) print(anova(submod,mod)) So m...
2011 Mar 25
2
A question on glmnet analysis
Hi, I am trying to do logistic regression for data of 104 patients, which have one outcome (yes or no) and 15 variables (9 categorical factors [yes or no] and 6 continuous variables). Number of yes outcome is 25. Twenty-five events and 15 variables mean events per variable is much less than 10. Therefore, I tried to analyze the data with penalized regression method. I would like please some of the