Displaying 5 results from an estimated 5 matches for "traskdata".
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2010 Jan 14
0
installing RCurl when libcurl is in non-standard location
...oung> gmake -version
GNU Make 3.80
Copyright (C) 2002 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.
There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A
PARTICULAR PURPOSE.
[6] zork20:/home/jayoung> which curl-config
/home/jayoung/traskdata/bin_linux/curl-config
[7] zork20:/home/jayoung> curl-config --version
libcurl 7.19.7
[8] zork20:/home/jayoung> locate curl-config
/usr/bin/curl-config
/usr/share/man/man1/curl-config.1.gz
[16] zork20:/home/jayoung> /usr/bin/curl-config --version
libcurl 7.12.3
[9] zork20:/home/jayoung>...
2007 Dec 21
0
RMySQL installation
...o get it installed, albeit with some
warnings that I didn't understand (it took me a while to find where
our mysql libraries were), but when I tried to load it within R I got
an error:
> library(RMySQL)
Error in dyn.load(file, ...) :
unable to load shared library '/home/btrask/traskdata/lib/R/
library/RMySQL/libs/RMySQL.so':
ld.so.1: R: fatal: relocation error: file /home/btrask/traskdata/
lib/R/library/RMySQL/libs/RMySQL.so: symbol mysql_more_results:
referenced symbol not found
Error: package/namespace load failed for 'RMySQL'
I'm not a sysadmin and don&...
2011 Jun 07
1
XML segfault on some architectures
...email: jayoung ...at... fhcrc.org
-------------------------------------------------------------------
######## on 64-bit node
> library(XML)
> fileName <- system.file("exampleData", "test.xml", package="XML")
> fileName
[1] "/home/btrask/traskdata/lib_linux_64/R/library/XML/exampleData/test.xml"
> sessionInfo()
R version 2.13.0 (2011-04-13)
Platform: x86_64-unknown-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=C...
2009 Nov 10
1
compiling R-2.10.0 on solaris - lib_I_dbg_gen.so.1: version `DBG_GEN_5.1' not found
...t/gcc/lib:/
opt/gcc/lib/gcc/sparc-sun-solaris2.10:/opt/SUNWspro/lib:/usr/lib:/usr/
openwin/lib
setenv PATH /opt/gcc/bin:/bin:/sbin:/usr/sbin:/etc:/opt/SUNWspro/bin:/
usr/ccs/bin:/usr/sfw/bin
unsetenv R_HOME
./configure --enable-R-shlib R_PAPERSIZE='letter' --prefix='/home/
btrask/traskdata'
make
----------------------------
Here's some information on compiler versions, etc, etc
----------------------------
[72] bedrock:/home/jayoung> uname -a
SunOS bedrock 5.10 Generic_139555-08 sun4v sparc SUNW,Sun-Fire-T200
[17] bedrock:/home/jayoung> which gcc
/opt/gcc/bin/gcc...
2009 May 21
0
problems building R-2.9.0 on solaris
...-
sparc-64bit/lib:/opt/SUNWspro/lib:/usr/lib:/usr/openwin/lib
setenv PATH /home/jayoung/mysql/mysql-5.0.45-solaris10-sparc-64bit/lib/
bin:/bin:/sbin:/usr/sbin:/etc:/opt/SUNWspro/bin:/usr/ccs/bin
unsetenv R_HOME
./configure --enable-R-shlib R_PAPERSIZE='letter' --prefix='/home/
btrask/traskdata'
make
make install
Now, when I do that, configure looks like it completes OK, but during
"make" it fails. It also fails if I omit the "--enable-R-shlib"
during configure.
It fails in a different way if I use my regular environment (i.e.
start a new terminal, and use...