search for: trainingdata

Displaying 9 results from an estimated 9 matches for "trainingdata".

2009 Jul 23
1
Activation Functions in Package Neural
...omeone has a suggestion, please advise. The goal of the network is to properly classify a number as positive or negative. Simple 1-layer network with a single neuron in each layer. Rcode: trainInput <- matrix(rnorm(10)) trainAnswers <- ifelse(trainInput <0, -1, 1) trainNeurons <- 1 trainingData <- mlptrain(inp=trainInput, neurons=trainNeurons, out=trainAnswers, it=1000) ## To call this network, we can see how it works on a set of known positive and negative values testInput <- matrix(-2:2) mlp(testInput, trainingData$weight, trainingData$dist, trainingData$neurons, trainingData$a...
2009 Jul 17
2
Getting the C-index for a dataset that was not used to generate the logistic model
...that I've split into two halves, one for training the logistic model, and the other for evaluating it. The structure is as follows: column headers are "got a loan" (dichotomous), "hourly income" (continuous), and "owns own home" (dichotomous) The training data is *trainingData[1,] = c(0,12,0)* *...* etc and the validation data is *validationData[1,] = c(1,35,1)* *...* etc I use Prof. Harrell's excellent Design modules to perform a logistic regression on the training data like so: *logit.lrm <- lrm(gotALoan ~ hourlyIncome+ownsHome, data=trainingData)* *lrm(formul...
2012 Nov 15
1
Can't see what i did wrong..
with pred.pca<-predict(splits[[i]]$pca,trainingData at samples)[,1:nPCs] dframe<-as.data.frame(cbind(pred.pca,class=isExplosive(trainingData,2))); results[[i]]$classifier<-ksvm(class~.,data=dframe,scaled=T,kernel="polydot",type="C-svc", C=C,kpar=list(degree=degree,scale=scale,offset=offset),prob.model=T) and a degree of...
2011 Apr 18
2
Predicting with a principal component regression model: "non-conformable arguments" error
...23 4 7 type2 30 ..... 18 11 type1 45 if I train a PCR model using the training data #2 and try to predict with the resulting model and the data from "newdata.csv", e.g., ################################## trainingdata <- read.csv("mydata_without_train_column.csv", header=TRUE) trainingdata <- data.frame(trainingdata) testingdata <- read.csv("newdata.csv", header=TRUE) testingdata <- data.frame(testingdata) pcrmodel2 <- pcr(response ~ var1+var2+var3, data = trainingdata) pr...
2010 Dec 21
1
randomForest: tuneRF error
Just curious if anyone else has got this error before, and if so, would know what I could do (if anything) to get past it: > mtry <- tuneRF(training, trainingdata$class, ntreeTry = 500, stepFactor = 2, improve = 0.05, trace = TRUE, plot = TRUE, doBest = FALSE) mtry = 13 OOB error = 0.62% Searching left ... mtry = 7 OOB error = 1.38% -1.222222 0.05 Searching right ... mtry = 26 OOB error = 0.24% 0.6111111 0.05 mtry = 52 OOB error = 0.07% 0...
2009 Jan 15
2
problems with extractPrediction in package caret
...quot;, returnResamp = "all", returnData=TRUE, verboseIter = TRUE) rftrain <- train(x=train_x, y=trainclass, method="rf", tuneGrid=tuneGrid, tr.control=rfControl) pred <- predict(rftrain) pred # this works fine expred <- extractPrediction(rftrain) Error in models[[1]]$trainingData : $ operator is invalid for atomic vectors My predictors are 28 numeric attributes and one factor. I`m working with the latest version of caret and R 2.7.2 on WinXP. Any advice is very welcome. Thanks. TIM ------------------------------------------------------------------------------- Dipl...
2010 Jul 10
4
eliminating constant variables
...ppears in the data there are a lot of fields that are constant or all missing values - which prevents the model from being built. Can someone point me the right direction as to how I can automatically purge my data file of these useless fields. Thanks in advance, pdb train <- read.csv("TrainingData.csv") library(gbm) i.gbm<-gbm(TargetVariable ~ . ,data=train,distribution="bernoulli..... 1: In gbm.fit(x, y, offset = offset, distribution = distribution, ... : variable 5: var1 has no variation. -- View this message in context: http://r.789695.n4.nabble.com/eliminating-constant-...
2012 Jul 30
6
Convert variable to STring
Dear all, I have a variable that I would like also to use it as a string. The reasons is that I want to collect results from different function to one table.. So when I use the  colnames(mymatrix) <-c(function1.function2,function3) the function1, function2, function3 to be "converted" to simple strings so as  colnames(mymatrix)
2009 Jun 08
3
caret package
Hi all I am using the caret package and having difficulty in obtaining the results using regression, I used the glmnet to model and trying to get the coefficients and the model parameters I am trying to use the extractPrediction to obtain a confusion matrix and it seems to be giving me errors. x<-read.csv("x.csv", header=TRUE); y<-read.csv("y.csv", header=TRUE);