search for: tmod

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2004 Sep 21
2
Bootstrap ICC estimate with nested data
I would appreciate some thoughts on using the bootstrap functions in the library "bootstrap" to estimate confidence intervals of ICC values calculated in lme. In lme, the ICC is calculated as tau/(tau+sigma-squared). So, for instance the ICC in the following example is 0.116: > tmod<-lme(CINISMO~1,random=~1|IDGRUP,data=TDAT) > VarCorr(tmod) IDGRUP = pdLogChol(1) Variance StdDev (Intercept) 0.1829931 0.427777 Residual 1.3907732 1.179310 > 0.18299/(0.18299+1.39077) [1] 0.1162757 Using the bootstrap library, I can set up theta to do the ICC as follows...
2010 Nov 06
2
3-way interaction simple slopes
Can anyone show me how to test for significant simple slopes of a 3-way interaction, with covariates. my equation tmod<-(glm(PCL~ rank.f + gender.f + MONTHS + CEXPOSE.M + bf.m + MONTHS*CEXPOSE.M*bf.m, data=mhatv, family=gaussian ,na.action=na.omit)) Thank you Mike [[alternative HTML version deleted]]
2018 Jan 22
2
How to address the following: CRAN packages not using Suggests conditionally
...ase GenCAT GiANT NMF PlackettLuce >> ProFit ProFound RNAseqNet SIBERG antaresRead apcluster cherry clValid coloc >> colorhcplot entropart filematrix fuzzyforest fuzzyjoin glycanr hexbin loon >> nscancor ordinalgmifs penalized phangorn propr shiftR switchr tcgsaseq >> tileHMM tmod >> >> then give ERRORs or (new) WARNINGs on their checks. Please correct ASAP, >> and by Feb 20 to safely retain the package on CRAN. >> >> > ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman...
2018 Jan 22
1
How to address the following: CRAN packages not using Suggests conditionally
...d RNAseqNet SIBERG >> ??????????? antaresRead apcluster cherry clValid coloc colorhcplot >> ??????????? entropart filematrix fuzzyforest fuzzyjoin glycanr hexbin >> ??????????? loon nscancor ordinalgmifs penalized phangorn propr shiftR >> ??????????? switchr tcgsaseq tileHMM tmod >> >> ??????????? then give ERRORs or (new) WARNINGs on their checks. >> ??????????? Please correct ASAP, and by Feb 20 to safely retain the >> ??????????? package on CRAN. >> >> >> ??????? ______________________________________________ >> ??????? R-d...
2018 Jan 22
0
How to address the following: CRAN packages not using Suggests conditionally
...Shrink GRANBase GenCAT GiANT NMF > PlackettLuce ProFit ProFound RNAseqNet SIBERG antaresRead apcluster > cherry clValid coloc colorhcplot entropart filematrix fuzzyforest > fuzzyjoin glycanr hexbin loon nscancor ordinalgmifs penalized phangorn > propr shiftR switchr tcgsaseq tileHMM tmod > > then give ERRORs or (new) WARNINGs on their checks.? Please correct > ASAP, and by Feb 20 to safely retain the package on CRAN. >
2018 Jan 22
0
How to address the following: CRAN packages not using Suggests conditionally
...e ProFit ProFound RNAseqNet SIBERG > antaresRead apcluster cherry clValid coloc colorhcplot > entropart filematrix fuzzyforest fuzzyjoin glycanr hexbin > loon nscancor ordinalgmifs penalized phangorn propr shiftR > switchr tcgsaseq tileHMM tmod > > then give ERRORs or (new) WARNINGs on their checks.? > Please correct ASAP, and by Feb 20 to safely retain the > package on CRAN. > > > ______________________________________________ > R-devel at r-project.org <mailt...