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2010 Oct 20
0
bootstrapping nonlinear mixed effects models
...ot <- nls(weight ~ SSlogis(Time, a, b, c), data=Soybean[indices, ]) return(coef(mboot)) } require(boot) boot1 <- boot(Soybean, bstat, 2000) boot1 For nonlinear mixed effects models it doesn't work. > stat.nlme <- function(A, indices) { + boot.nlme <- nlme(Gdiff/0.5 ~ SSlogis(tmmean,a,b,c), + fixed=list(a+b+c~1), + random = list(a+b+c~1), data = Soybean[indices,]) + return(fixef(boot.nlme)) + } > > require(boot) > bb <- boot(Soybean, stat.nlme, 2000) Error in parse(text = paste("~", paste(nVal, collapse = "/"))) : unexpected end of input...