search for: tkeitt

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2020 Apr 21
2
R not running under lldb? (osx)
I see: Tims-Air:~ tkeitt$ R --version R version 3.6.3 (2020-02-29) -- "Holding the Windsock" Copyright (C) 2020 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin15.6.0 (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under the terms...
2020 Apr 22
1
R not running under lldb? (osx)
...in notarization, the application has to be fully signed, has to use > hardened run-time and may not enable debugging entitlements. One part of > the hardened run-time is that no debugger is allowed to attach to the > application. > > > > On 22/04/2020, at 8:59 AM, Tim Keitt <tkeitt at gmail.com> wrote: > > > > I see: > > > > Tims-Air:~ tkeitt$ R --version > > > > R version 3.6.3 (2020-02-29) -- "Holding the Windsock" > > > > Copyright (C) 2020 The R Foundation for Statistical Computing > > > > Platform:...
2007 Jun 07
1
Ubu edgy + latest CRAN R + Rmpi = no go
...e other packages that only work in 2.4+!) Could this be a problem with the latest Ubu debs on CRAN? The Rmpi author says his R 2.5 setup works fine. CC me please as I'm not subscribed. THK -- Timothy H. Keitt, University of Texas at Austin Contact info and schedule at http://www.keittlab.org/tkeitt/ Reprints at http://www.keittlab.org/tkeitt/papers/ ODF attachment? See http://www.openoffice.org/
2020 Apr 21
0
R not running under lldb? (osx)
...notarized. In order to obtain notarization, the application has to be fully signed, has to use hardened run-time and may not enable debugging entitlements. One part of the hardened run-time is that no debugger is allowed to attach to the application. > On 22/04/2020, at 8:59 AM, Tim Keitt <tkeitt at gmail.com> wrote: > > I see: > > Tims-Air:~ tkeitt$ R --version > > R version 3.6.3 (2020-02-29) -- "Holding the Windsock" > > Copyright (C) 2020 The R Foundation for Statistical Computing > > Platform: x86_64-apple-darwin15.6.0 (64-bit) > >...
2007 Mar 18
1
Setting site-wide default CRAN repository?
...tions when using 'install.packages()'. I know how to do this for a single account. Modifying files in /etc/R does not seem to work. (cc me please - I think I'm not subscribed). THK -- Timothy H. Keitt, University of Texas at Austin Contact info and schedule at http://www.keittlab.org/tkeitt/ Reprints at http://www.keittlab.org/tkeitt/papers/ ODF attachment? See http://www.openoffice.org/
2003 Aug 17
3
anon cvs?
I'd like to add an "on.exit" flag to "reg.finalizer". Is it possible to check out the source via anon cvs? (If so, which module is preferred for this sort of thing, and which diff flags?) Tim -- Timothy H. Keitt <tkeitt@mail.utexas.edu> University of Texas at Austin
2007 May 30
4
Connecting to PostgreSQL/PostGIS from R (rgdal?)
Hello, I've been trying every now and then to find a cross operating system solution that would let me access PostgreSQL (and PostGIS) from R, or to access R from PostgreSQL. I know of pl/r, which accomplishes the latter, but has yet to be successfully ported to Windows. Similarly, I've tried to use Rdbi and DBI, but I haven't had luck with those on Windows either for connecting to
2015 Apr 21
1
Typo in src/scripts/config
Was writing a short R script to modify compile flags and saw this typo: Index: config =================================================================== --- config (revision 68217) +++ config (working copy) @@ -61,7 +61,7 @@ CXX1X C++ compiler command for C++11 code CXX1XSTD flag used to enable C++11 support CXX1XFLAGS C++11 compiler flags - CXX1XXPICFLAGS +
2017 Mar 30
2
Transferring ownership of R-managed buffer
On Wed, Mar 29, 2017 at 4:56 PM, Gabriel Becker <gmbecker at ucdavis.edu> wrote: > The concept of having a vector which is a "window" into another vector > without duplication ( which I suspect is at least related to your use-case, > though I could be wrong) is a special case of one of alt-representations I > have implemented there. > Nice. That is exactly what I
2017 Mar 30
0
Transferring ownership of R-managed buffer
On Thu, Mar 30, 2017 at 11:52 AM, Tim Keitt <tkeitt at utexas.edu> wrote: > > On Wed, Mar 29, 2017 at 4:56 PM, Gabriel Becker <gmbecker at ucdavis.edu> > wrote: > >> The concept of having a vector which is a "window" into another vector >> without duplication ( which I suspect is at least related to your u...
2018 Feb 23
1
Bug in installing rgdal
*@* *BLAS: /usr/lib/libblas/libblas.so.3.6.0LAPACK: /usr/lib/lapack/liblapack.so.3.6.0locale: [1] LC_CTYPE=en_IN.UTF-8 LC_NUMERIC=C LC_TIME=en_IN.UTF-8 [4] LC_COLLATE=en_IN.UTF-8 LC_MONETARY=en_IN.UTF-8 LC_MESSAGES=en_IN.UTF-8 [7] LC_PAPER=en_IN.UTF-8 LC_NAME=C LC_ADDRESS=C [10] LC_TELEPHONE=C LC_MEASUREMENT=en_IN.UTF-8
2002 Nov 09
1
Calling function with proto in Rinternals.h
(Tried this query on r-help with no luck, maybe someone here can help?) I would like to call the 'RFinalizerEx' function that appears in Rinternals.h using ".Call". It worked for me in the past, but now I get an error message something like: 'call function name not in call table'. I'm using the 1.6.1 rpm from CRAN. Anyone know what's going on? Thanks. Tim --
2002 May 22
1
signature match in setMethod (PR#1592)
Full_Name: Tim Keitt Version: 1.5 OS: Linux Submission from: (NULL) (128.227.201.237) The function "setMethod" makes the following call to "insertMethod": allMethods <- insertMethod(allMethods, signature, fnames[1:length(signature)], asMethodDefinition(definition, signature)) If I understand insertMethod correctly, the third argument should be the names of the
2002 Jan 29
3
dimnames usage in ts (PR#1288)
Full_Name: Tim Keitt Version: 1.4 OS: Linux Submission from: (NULL) (129.49.19.70) I think this code in 'ts' is incorrect: if (is.matrix(data) || is.data.frame(data)) { nseries <- ncol(data) ndata <- nrow(data) dimnames(data) <- list(NULL, names) } since > x <- data.frame(matrix(rnorm(100),ncol=10)) > names(x) [1] "X1"
2014 May 22
1
Excluding objects from save.image
When dealing with object holding pointers that are only valid during a single session, it would be convenient to exclude them from being saved with the session image. (I am assuming that `quit` calls `save.image` before quitting or is it internal?) Currently they are saved with the pointer converted to NULL. Its a bit surprising for users not realizing the object is no longer valid. My thought is
2017 Mar 29
0
Transferring ownership of R-managed buffer
...rrently AFAIK). I know that the release after next is quite a long wait but unfortunately that is how it played out. So anyway, in the future this will be easy to do, and what you are trying to do may even happen automatically. More comments inline. On Wed, Mar 29, 2017 at 11:36 AM, Tim Keitt <tkeitt at utexas.edu> wrote: > http://www.keittlab.org/ > > On Wed, Mar 29, 2017 at 1:04 PM, Herv? Pag?s <hpages at fredhutch.org> wrote: > > > Hi Tim, > > > > On 03/29/2017 08:24 AM, Tim Keitt wrote: > > > >> I have a use case where I would like to c...
2017 Mar 29
2
Transferring ownership of R-managed buffer
http://www.keittlab.org/ On Wed, Mar 29, 2017 at 1:04 PM, Herv? Pag?s <hpages at fredhutch.org> wrote: > Hi Tim, > > On 03/29/2017 08:24 AM, Tim Keitt wrote: > >> I have a use case where I would like to create an SEXP around an existing >> buffer that is managed by R, thus avoiding a copy operation. >> > > What to you mean exactly by "an existing
2002 Nov 07
0
Finalizer function?
I have some code that calls R's finalizer interface, e.g., .Call('R_RegisterFinalizerEx', object, function, TRUE) This worked pre 1.6, but now I get '.Call function name not in call table'. Are functions listed in Rinternals.h no longer available in .Call? Or is this a namespace issue? How do I reference the function? Thanks. Tim -- Timothy H. Keitt The University of
2016 May 25
3
Suggestion: mkString(NULL) should be NA
On Wed, May 25, 2016 at 7:22 AM, Michael Lawrence <lawrence.michael at gene.com > wrote: > On Wed, May 25, 2016 at 4:23 AM, Jeroen Ooms <jeroen.ooms at stat.ucla.edu> > wrote: > I'm not disagreeing with what's been said in this thread, but I can't help but recall that I brought up this exact issue probably 15 years ago and was told (by Brian, I believe)
2017 Mar 29
3
Transferring ownership of R-managed buffer
I have a use case where I would like to create an SEXP around an existing buffer that is managed by R, thus avoiding a copy operation. If I have something like: void *p = (void*) RAW(PROTECT(Rf_allocVector(RAWSXP, n))); ... additional maniupulation ... SEXP x = somefunc(SXPTYPE, n, p); // ???? Is there a "placement" constructor available? (I have arranged for the corresponding