Displaying 3 results from an estimated 3 matches for "time30".
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2009 May 09
4
how to get design matrix?
How do you get the design matrix R used when calculating ANOVA?
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2009 May 10
2
plot(survfit(fitCox)) graph shows one line - should show two
...I believe, show two lines one for survival in each of two treatment (Drug) groups, however my plot shows only one line. What am I doing wrong?
My code is reproduced below, my figure is attached to this EMail message.
John
> #Create simple survival object
> GVHDdata<-list(Time=GVHD$Time,Time30=(GVHD$Time)/30,
+ Age=GVHD$Age,Drug=GVHD$Drug,Died=GVHD$Died,
+ AgeGrp=cut(GVHD$Age,breaks=c(0,15,25,45)))
>
> summary(GVHD$Drug)
MTX MXT+CSP
32 32
>
>
>
> fit0<-coxph(Surv(Time30,Died)~Drug,data=GVHDdata)
> summary(fit0)
Call:
coxph(formula = Surv(Time30...
2009 May 11
1
Warning trying to plot -log(log(survival))
...should give two lines (one for each treatment) gives only one line and a warning message. I would appreciate help getting two lines, and an explanation of the warning message. My problem may the that I have very few events in one of my strata, but I don't know.
Thanks,
John
fit0<-coxph(Surv(Time30,Died)~strata(Rx)+Age,data=GVHDdata)
plot(survfit(fit0),fun="cloglog")
WARNING: Warning in xy.coords (x, y, xlabel, ylabel, log) :
2 x values <=0 omitted from logarithmic plot
> print(survfit(fit0),fun="cloglog")
Call: survfit.coxph(object = fit0)
n events med...