search for: tilingarray

Hi,     I want to use segChrom() method in tilingArray package. For that I need to create a probeAnno object. I could not find much much info by ?probeAnno. I need help in creating  probeAnno object. Snap shot of the file(.txt): chr1 2500014 2500038 + 0.232689943122845 chr1 2500039 2500063 + 2.60502410304227 chr1 2500062 2500086 + 0.0756595313279895 c...

...h with this updated R, it that now I get an error instead of a timeout. Maybe the code that fires the R subprocess in charge of running tools::buildVignettes() now does better error checking/handling, I don't know (it seems to have changed between the 2 versions of R). A new mystery is why the tilingArray package now does build on Windows (it was timing out with the previous version of R). I already sent the content of adSplit/inst/doc/Makefile in the previous thread and tilingArray does nothing different: all: findsegments costMatrix assessNorm segmentation plotAlongChrom clean findsegments: find...