Displaying 2 results from an estimated 2 matches for "thaliana".
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thalia
2008 Dec 10
0
FW: Kegg.db with GOstats
...gt; I am currently working on Streptomyces coelicolor microarray data.
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> I have some clusters of genes and I would like to annotate them, but as you may know, this organism is not yet annotated with Gene Ontologies. There is no database (such as at "ath1121501.db" for Arabidopsis thaliana) available to use with the GOstats package.
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> So, I would like to use at least the Kegg.db package with GOstats.
> Can you tell me how to include KEGG.db ? I can't find anything about it.
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> Thank you very much.
> Roxane LEGAIE.
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> Roxane LEGAIE...
2007 Jan 17
4
Memory leak with character arrays?
Hi -
When I'm trying to read in a text file into a labeled character array,
the memory stamp/footprint of R will exceed 4 gigs or more. I've seen
this behavior on Mac OS X, Linux for AMD_64 and X86_64., and the R
versions are 2.4, 2.4 and 2.2, respectively. So, it would seem that
this is platform and R version independant.
The file that I'm reading contains the upstream regions