Displaying 1 result from an estimated 1 matches for "testseq_fa".
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testseq_df
2009 Dec 30
1
Factor and Level Issue
...----------------------------
>>> library(seqinr)
>>> library("kernlab")
>>>
>>
>>
>> > str(mars500_1_df)
>> 'data.frame': 256 obs. of 501 variables:
>> All of which are factors with 4 levels
>>
>>
>> testSeq_fa=read.fasta("temp1.fasta")
>>> testSeq_seq=t(getSequence(testSeq_fa))
>>> testSeq_df=as.data.frame(testSeq_seq,stringsAsFactors=FALSE)
>>> testSeq_df = cbind(Class="-",testSeq_df)
>>> testSeq_df = data.frame(lapply(testSeq_df,factor))
>>&...