Displaying 1 result from an estimated 1 matches for "td809122".
2011 Feb 24
1
reshaping list into a contingency table
...t, for each gene, I have a 2x2 contingency
table, such as:
gene rpkm diff
gene1 23 50
gene1 13 120
gene2 111 220
gene2 827 1200
gene3 75 998
gene3 71 910
I have found one post with the same problem
(http://r.789695.n4.nabble.com/R-Reshape-into-a-contingency-table-Fisher-s-test-td809122.html),
but the response was very customized for that format, and I haven't been
able to implement it for my need.
After the table is re-formatted, I know how to do all the splitting and
fisher tests. All I need is the re-shaping of the table, which will have
~9000 genes in it.
Any insights a...