Displaying 3 results from an estimated 3 matches for "subspeci".
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2009 Nov 04
2
splitting scientific names into genus, species, and subspecies
I have a list of scientific names in a data set. I would like to split the
names into genus, species and subspecies. Not all names include a
subspecies. Could someone show me how to do this?
My example code is:
a <- matrix(c('genusA speciesA', 10,
'genusB speciesAA', 20,
'genusC speciesAAA subspeciesA', 15,
'genusC speciesAAA...
2009 Sep 17
1
How to colour the tip labels in a phylogenetic tree
Hi,
Using Ape, I have constructed an object of class "phylo", using the
method 'nj' (lets call the object 'tree_ja').
I also have a given subset of 'tree_ja' in a vector (lets call the
vector 'subspecies').
What I want to do, is construct a nj tree - plot(tree_ja) - but have the
species in vector 'subspecies' shown as red at the tips of the tree.
The closest I've come is this:
Given that 'tree_ja$tip.label' provides the following:
[1] "1_T1" "2_T1&q...
2012 Nov 25
1
Multiple Range Means Test
Hello,
My boss wants me to do a Duncan's test, which is under the agricolae
package. Unfortunately I am not versed enough in R to run my data. I
have 7 subspecies of deer mouse for which I have 23 measurements which
are my variables of interest. I have run an ANOVA for each of the set
of subspecies and variables, my data look like this:
subspecies WMF
1 rowleyi 2.50
2 rowleyi 2.30
3 rowleyi 2.35
49 beatae 2.20
50 beatae 2.35
51...