search for: subreplicates

...ate 1:10) One could think about such mixed-effect model: my.model<-lme(fixed = accuracy_measure~model_type, random = ~1|species/replicate) I do not expand here into model simplification nor if it is best to use lme or lmer, YET... but here are more conceptual questions 1) my replicates & subreplicates are paired in the sense that they come from the same split of the data. As an example for species X, the 20 observations of replicate1 of model A and B (10 for A and 10 for B) are linked by a same data split which is likely to influence my accuracy measure. In the same way the 2 observations replic...