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2009 Apr 07
2
Minimum Spanning Tree
Hi all, I'm very new to R and read a few tutorials, however I'm having
difficulty trying to figure out how to plot a minimum spanning tree. I have
a csv file that contains an n-by-n matrix of distances between strains of
bacteria called matrix.csv.
Looks like:
id,strain1, strain2,strain3
strain1,0,.2,.8
strain2,.3,0,.7
strain3,.4,.6,0
I've been messing around with some information I've found on the web that
prints out an mst, however I think it does it with random values, instead of
values provided in a dataset (like from my csv file). Here's what I tried
looks like:...