Displaying 2 results from an estimated 2 matches for "sqchord".
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schore
2014 Jun 30
1
How to combine/join/merge etc PCA and Cluster?
...'m using to make my combination, as
presented by Bocard in Numerical Ecology Analysis with R chapter 4 or 5.
with this code, it is possible to join PCA and Cluster however, without
differentiating the colors of each ecosystem.
#PCA
mydata.pca<-rda(mydata)
#Cluster
mydata.w <- hclust(dist(Sqchord.mydata), "ward")
plot(mydata.w, hang=-1)
rect.hclust(mydata.w, 5)
# Cut the dendrogram to yield 5 groups
gr <- cutree(mydata.w, k=5)
grl <- levels(factor(gr))
# Get the site scores, scaling 1
sit.sc1 <- scores(mydata.pca, display="w", scaling=3)
# Plot the sites with...
2007 Jul 26
5
ROC curve in R
Hi,
I need to build ROC curve in R, can you please provide data steps / code
or guide me through it.
Thanks and Regards
Rithesh M Mohan
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