search for: spurdle

...[redirection ...] ? R CMD --help /Library/Frameworks/R.framework/Resources/bin/Rcmd: line 62: exec: --: invalid option exec: usage: exec [-cl] [-a name] file [redirection ...] On Windows you indeed get a useful list of commands and more helpful tips. Gabor On Sun, Jun 30, 2019 at 11:36 PM Abby Spurdle <spurdle.a at gmail.com> wrote: > > > First time posting in the R mailing lists so hopefully this works well. > > I noticed when I type `R CMD` I get this unhelpful message: > > /usr/lib/R/bin/Rcmd: 60: shift: can't shift that many > > I wasn't able to repro...

...rdoch.duncan at gmail.com> <murdoch.duncan at gmail.com> Reply: Duncan Murdoch <murdoch.duncan at gmail.com> <murdoch.duncan at gmail.com> Date: 2 February 2019 at 15:37:16 To: Barry Rowlingson <b.rowlingson at lancaster.ac.uk> <b.rowlingson at lancaster.ac.uk>, Abs Spurdle <spurdle.a at gmail.com> <spurdle.a at gmail.com> Cc: r-devel <r-devel at r-project.org> <r-devel at r-project.org> Subject: Re: [Rd] Runnable R packages On 02/02/2019 8:27 a.m., Barry Rowlingson wrote: > I don't think anyone denies that you *could* make an EXE to d...

sorry, release "versions" On Mon, Jun 8, 2020 at 11:17 AM Abby Spurdle <spurdle.a at gmail.com> wrote: > > On Mon, Jun 8, 2020 at 4:09 AM Fox, John <jfox at mcmaster.ca> wrote: > > Does it make sense to withdraw the Windows R 4.0.1 binary until the issue is resolved? > > Yes, it does. > All the release reversions should be removed.

...e run by `R CMD RUN foo_1.1.1.tar.gz` then it would be so much easier to develop and test. If people think this adds value, then if they want to offer that value to me as $ or ?, I'd consider writing it if their total value was more than my cost.... Barry On Sat, Feb 2, 2019 at 12:54 AM Abs Spurdle <spurdle.a at gmail.com> wrote: > > Further to my previous post, > it would be possible to create an .exe file, say: > > my_r_application.exe > > That starts R, loads your R package(s), calls the R function of your choice > and does whatever else you want. > > Ho...

In principle a good idea, but I'm not sure the whereabouts of Catherine Loader are known at this point. Last peeps from her on the net seem to be about a decade old. .pd > On 18 May 2020, at 10:31 , Abby Spurdle <spurdle.a at gmail.com> wrote: > > This has come up before. > > Here's the last time: > https://stat.ethz.ch/pipermail/r-devel/2019-March/077478.html > > I guess my answer to the following the question... > > Perhaps we should ask permission to > n...

> On Jan 14, 2020, at 3:29 PM, Abby Spurdle <spurdle.a at gmail.com> wrote: > >> I do want to entice people to have a long look beyond closed >> source OS into the world of Free Software where not only R is >> FOSS (Free and Open Source Software) but (all / almost) all the >> tools you use are of that same s...

...C.10208432 0.0443 0.004081 0.0639 > >> FQC.10218466 0.0116 0.000131 0.0115 > >> ... > >> > >> the distribution is not normal, it is right-skewed. > >> > >> Cheers, > >> Ana > >> > >> On Fri, Oct 9, 2020 at 2:13 AM Abby Spurdle <spurdle.a at gmail.com> wrote: > >> > > >> > > My understanding is that this represents bivariate normal > >> > > approximation of the data which uses the kernel density function to > >> > > test for inclusion within a level set. (plea...

Honestly, I don't see the motivation for this. There are many similar projects that are mature, so my feedback would be: don't reinvent the wheel and contribute to those. I?aki El vie., 14 jun. 2019 3:18, Abby Spurdle <spurdle.a at gmail.com> escribi?: > I thought that I'd get more feedback. > But it's ok, I understand. > > I wanted to note that I've moved symbyont to GitLab, which is where I > should have put it, in the first place. > > Also, I'm not planning to start...

...lot(a, mapping = aes(x = mean, y = var)) p <- p + geom_density_2d() + geom_point() + my.theme + ggtitle("SNPS_red") and probably I can increase that threshold... Any idea how do I interpret data points that are left contained within the ellipses? On Fri, Oct 9, 2020 at 6:09 PM Abby Spurdle <spurdle.a at gmail.com> wrote: > > You could assign a density value to each point. > Maybe you've done that already...? > > Then trim the lowest n (number of) data points > Or trim the lowest p (proportion of) data points. > > e.g. > Remove the data points with...

> I have noticed a discrepancy between is.list() and is(x, ?list?) There's a similar problem with inherits(). On R 3.5.3: > f = function () 1 > class (f) = "f" > is.function (f) [1] TRUE > inherits (f, "function") [1] FALSE I didn't check what happens with: > class (f) = c ("f", "function") However, they should have the same

...python for a wrapper in personal projects, given python comes > pre-installed on many linux systems and OS X, but I completely understand > not wanting to burden Windows users with an extra python dependency to > install.) > > > > > > On Sun, Jun 30, 2019 at 8:08 PM Abby Spurdle <spurdle.a at gmail.com> wrote: > > > In that case, I was wrong. > > And I must apologize... > > > > In saying that, good to see Windows out performing Linux on the command > > line... > > > > > > On Mon, Jul 1, 2019 at 11:30 AM G?bor Cs?rdi...

...item markup for R documentation files, if indeed this matches your search, thing I am not sure. Something that looks like... value{ The \\code{list} owns following names \\item{alpha}{double vector} \\item{beta}{integer vector} \\item{delta}{raw vector} } Best Le lun. 6 janv. 2020 ? 21:18, Abby Spurdle <spurdle.a at gmail.com> a ?crit : > Do you just need something on pen and paper? > (In which case, I don't see why it needs to be "standard"). > > Or do you need something that can be used with bison/yacc/cup/etc to > produce a parser? > > On a side note,...

(Using R 3.5.3). I found bugs in head() and tail(). The following works: > f = function () 1 > head (f) 1 function () 2 1 However, the following does not: > class (f) = "f" > head (f) Error in x[seq_len(n)] : object of type 'closure' is not subsettable [[alternative HTML version deleted]]

....10132112 0.0275 0.002088 0.0457 > FQC.10201128 0.0169 0.000289 0.0170 > FQC.10208432 0.0443 0.004081 0.0639 > FQC.10218466 0.0116 0.000131 0.0115 > ... > > the distribution is not normal, it is right-skewed. > > Cheers, > Ana > > On Fri, Oct 9, 2020 at 2:13 AM Abby Spurdle <spurdle.a at gmail.com> wrote: > > > > > My understanding is that this represents bivariate normal > > > approximation of the data which uses the kernel density function to > > > test for inclusion within a level set. (please correct me) > > > > Y...

...02678 0.0517 FQC.10119363 0.0220 0.000978 0.0313 FQC.10132112 0.0275 0.002088 0.0457 FQC.10201128 0.0169 0.000289 0.0170 FQC.10208432 0.0443 0.004081 0.0639 FQC.10218466 0.0116 0.000131 0.0115 ... the distribution is not normal, it is right-skewed. Cheers, Ana On Fri, Oct 9, 2020 at 2:13 AM Abby Spurdle <spurdle.a at gmail.com> wrote: > > > My understanding is that this represents bivariate normal > > approximation of the data which uses the kernel density function to > > test for inclusion within a level set. (please correct me) > > You can fit a bivariate normal...

It may be possible to create an R-like programming language that transcompiles into R code (or otherwise constructs R objects and calls R functions). I'm not sure whether it would pass R check or not, I will probably try... But the bigger question is: Should CRAN accept packages written in such a way? I could email Kurt Hornik or Uwe Ligges, and ask them. However, I thought that I would ask

Kia Ora Let's say we have: "myreplacementfunction<-" = function (..., value) { call = sys.call () print (as.list (call) ) 0 } Then we call: x = 0 myreplacementfunction (x, y, z) = 0 It will return: [[1]] `myreplacementfunction<-` [[2]] `*tmp*` [[3]] y [[4]] z $value <promise: 0x06fb6968> There's two problems here. Firstly, x has to be defined otherwise we

...bjects as data (like putting them into a matrix), you're likely going to want vectorized operations over them, which means formalized vector and matrix classes. S4Vectors in Bioconductor facilitates this for vectors, but not for higher-order arrays. Michael On Sun, Jul 7, 2019 at 4:44 PM Abby Spurdle <spurdle.a at gmail.com> wrote: > > > I am not sure if there is an existing solution to this, but I want my S4 > > objects inside a list matrix showing correctly. > > R> matrix(lst, 2) > > [,1] [,2] [,3] [,4] [,5] > > [1,] ? ? ? ? ? > &g...

...> > > > > If people think this adds value, then if they want to offer that value > > to me as $ or ?, I'd consider writing it if their total value was more > > than my cost.... > > > > Barry > > > > > > On Sat, Feb 2, 2019 at 12:54 AM Abs Spurdle <spurdle.a at gmail.com> wrote: > >> > >> Further to my previous post, > >> it would be possible to create an .exe file, say: > >> > >> my_r_application.exe > >> > >> That starts R, loads your R package(s), calls the R function of...

> My understanding is that this represents bivariate normal > approximation of the data which uses the kernel density function to > test for inclusion within a level set. (please correct me) You can fit a bivariate normal distribution by computing five parameters. Two means, two standard deviations (or two variances) and one correlation (or covariance) coefficient. The bivariate normal