search for: snpper

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2007 Feb 05
3
RSNPper SNPinfo and making it handle a vector
If I run an analysis which generates statistical tests on many SNPs I would naturally want to get more details on the most significant SNPs. Directly from within R one can get the information by loading RSNPer (from Bioconductor) and simply issuing a command SNPinfo(2073285). Unfortunately, the command cannot handle a vector and therefore only wants to do one at a time. I tried the lapply and
2003 Oct 30
0
Release of Bioconductor 1.3
...urces. --- Rdbi, RdbiPgSQL: Generic framework for database access in R. Adapted from Rdbi authored by Timothy H. Keitt, with methods for accessing data stored in PostgreSQL tables (Adapted from Rdbi.PgSQL, authored by Timothy H. Keitt) --- SNPtools: Currently an interface to the SNPper data resource maintained at Childrens' Boston, which curates SNP-related data from a variety of sources. --- splicegear: A new package that works with oligonucleotide microarrays designed to monitor or confirm the existence of splice variants. It can extract simple splice-vari...
2003 Oct 30
0
Release of Bioconductor 1.3
...urces. --- Rdbi, RdbiPgSQL: Generic framework for database access in R. Adapted from Rdbi authored by Timothy H. Keitt, with methods for accessing data stored in PostgreSQL tables (Adapted from Rdbi.PgSQL, authored by Timothy H. Keitt) --- SNPtools: Currently an interface to the SNPper data resource maintained at Childrens' Boston, which curates SNP-related data from a variety of sources. --- splicegear: A new package that works with oligonucleotide microarrays designed to monitor or confirm the existence of splice variants. It can extract simple splice-vari...