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sid_compare
2011 Jul 22
0
pegas package: Problem using nuc.div and tajima d -> error with dist.dna() -> character variables must be duplicated in .C/.Fortran
...he help-page in
read.loci(). A piece from the dataset is displayed further below. Here
my code:
/Code/
library("ape")
library("adegenet")
library("pegas")
/
load with no problem.
/
/the command: /
> data.loci <- read.loci(file
="/Users/victor/Documents/SIV_Compartment/data/pegas_data_seq.txt",
header = TRUE,
col.loci = seq(1,200),
col.pop = TRUE)
/seems to work./
/in fact:/
> data.loci
Allelic data frame: 68563 individuals
200 loci
5 additional variables
/but as soon as I try to...