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sitenew
2007 May 04
0
Predicted Cox survival curves - factor coding problems...
...;- coxph(Surv(time,censor) ~ snp1 + sex + sitenew + geno + eth_self
+ strata(edu), data=coxsnps)
coef exp(coef) se(coef) z p
snp1 -0.4324 0.649 0.1073 -4.031 5.5e-05
sex 0.0604 1.062 0.0915 0.660 5.1e-01
sitenew1 0.5128 1.670 0.1381 3.712 2.1e-04
sitenew2 0.2688 1.308 0.1313 2.047 4.1e-02
geno 0.9702 2.639 0.0663 14.630 0.0e+00
eth_self 0.0871 1.091 0.1088 0.801 4.2e-01
profile1 <- data.frame(snp1=factor(c(0,1), levels=c("0...