search for: simwalk2

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2004 Nov 09
0
Re: QTL interval mapping in outbred populations
...analyses. You might also try QTL Express (http://qtl.cap.ed.ac.uk/), or if you are analysing smaller families, programs like MERLIN (Goncalo Abecasis's). For outbred families from natural populations, the estimation of multipoint ibd sharing can be done by various programs like MERLIN, LOKI, SIMWALK2 etc and the resulting kinship matrices can be imported into R. It's pretty easy to write a variance components or regression based QTL routine to analyse them. The programs by Jing hua Zhao, Beth Atkinson and others could also then be used for linkage analysis of survival data (http://www.ucl...