search for: sigpathway

...ant pathogen, Gibberella zeae, and I first used SAS to divide locus number with 10, 20, 30, or 40 on the fungal chromosome according to their location. I really want to see whether among the continual 10, 20, 30, or 40 locus has some expression pattern that different from rest genes. Because I know sigPathway (R package, pathway analysis with microarray data) can do this kind of job. What I use SAS to do is to subset locus in arbitrary genes numbers, such as 10, 20, 30, 40, or so on, and I hope to use sigPathway to analysis whether these genes chromosome location have effect on its gene expression. W...

...ost the binaries for mac os X so that I can just get back to work? Please? Or is there a surefire way to get the compilation process working again? Thanks in advance. -Zak ld: warning -L: directory name (/usr/local/lib) does not exist ld: can't locate file for: -lcc_dynamic make: *** [sigPathway.so] Error 1 ERROR: compilation failed for package 'sigPathway' ** Removing '/Library/Frameworks/R.framework/Versions/2.2/Resources/ library/sigPathway'

I have recently upgraded to Ubuntu Gutsy and, for the first time, am using a 64-bit installation. After failing miserably to install R from source, not a problem for me in the past with a 32-bit install, I went the route of using the Debian Etch build. This went smoothly, but I am unable to update my numerous R and BioConductor packages, getting non-zero exit status errors on each package. Is