search for: sequenceb

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2012 Feb 11
1
AMOVA error: 'bin' must be numeric or a factor
...oblem with the g variabel. In the example they type g <- factor(c(rep("A", 7), rep("B", 8))) I cannot find any information about what this c(rep....) does. Do anyone know about a proper manual for the amova function? My input file for g looks like this: sequenceA 1 sequenceB 1 sequenceC 1 . . . . sequenceD 5 . . sequenceE 9 sequenceF 9 Where sequenceA is in group 1, sequenceD is in group 5 and so on... If I type is.factor(g) I get FALSE I have also checked that the d (a matrix file) is a numeric file. It should be correct. is.numeric(d) TRUE...
2011 Apr 07
2
[LLVMdev] GSoC 2011: Superoptimization for LLVM IR
...itially not so useful, transform any operand A into an add with A plus 0. Later, this is important to prove we can use an add instruction to load any operand. Well, I think you got the idea of using a set of axioms... this, in practice, is important to prove an arbitrary sequence A is equivalent to SequenceB, and, if B is shorter than A, use B instead. Speaking of implementation, there will be a big list of transformations and a "for" loop trying each transformation and recursively applying more transformations, until we can show a code sequence is equivalent to another. This is a short over...
2011 Apr 08
0
[LLVMdev] GSoC 2011: Superoptimization for LLVM IR
...l, transform any operand A into > an add with A plus 0. Later, this is important to prove we can use an add > instruction to load any operand. Well, I think you got the idea of using a set > of axioms... this, in practice, is important to prove an arbitrary sequence A is > equivalent to SequenceB, and, if B is shorter than A, use B instead. Speaking > of implementation, there will be a big list of transformations and a "for" loop > trying each transformation and recursively applying more transformations, until > we can show a code sequence is equivalent to another. This...
2011 Apr 08
0
[LLVMdev] GSoC 2011: Superoptimization for LLVM IR
...l, transform any operand A > into an add with A plus 0. Later, this is important to prove we can use an > add instruction to load any operand. Well, I think you got the idea of using > a set of axioms... this, in practice, is important to prove an arbitrary > sequence A is equivalent to SequenceB, and, if B is shorter than A, use B > instead.  Speaking of implementation, there will be a big list of > transformations and a "for" loop trying each transformation and recursively > applying more transformations, until we can show a code sequence is > equivalent to another....
2011 Apr 06
7
[LLVMdev] GSoC 2011: Superoptimization for LLVM IR
Hello, I want to present my project for GSoC 2011 for LLVM below. It would be very nice to hear suggestions and your opinion, thanks! Superoptimization for LLVM IR Objective This project focuses on implementing superoptimization algorithms targeted at the LLVM IR. The project uses arbitrary LLVM bitcode as a training set to discover new peephole optimizations that can be later integrated into