search for: sdf

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2018 Jul 07
3
Completar un for, que falla al faltarle algún dato.
...length(levels(df.raw$Info)))) names(df.ok) <- levels(df.raw$Ques) rownames(df.ok) <- levels(df.raw$Info) # que incluya los datos de 'Answ' en donde correspondería J <- levels(df.raw$Ques) K <- levels(df.raw$Info) # El ideal me queda resuelto con esto: for (j in J){ sdf <- subset(df.raw, df.raw$Ques==j) for(k in K){ x <- sdf[which(sdf$Info==k), "Answ"] df.ok[k,j] <- as.character(x) } } Pero si en la segunda linea sustituyo df.raw por df.raw1 for (j in J){ sdf <- subset(df.raw1, df.raw1...
2018 Jan 31
3
Problems with "predict" function ii
...1,0,1) m mres<-m*(seq(1,12)) mres ssd<-rexp(1,1) ssd devs<-rep(0,length(mres)) for(i in 1:length(mres)){devs[i]<-rnorm(1,0,ssd)} devs plot(-10,-10,xlim=c(1,24),ylim=c(0,20000)) sales<-round((mres+devs)*1000) points(sales,pch=19) ptr<-cbind(1:length(sales),sales,sales,sales) ptr sdf<-data.frame(cbind(1:nrow(ptr),sales)) sdf colnames(sdf)<-c(?monat?,?mitte?) sdf attach(sdf) s.lm<-lm(mitte~monat) s.lm abline(s.lm,lty=2) news<-data.frame(monat=nrow(sdf)+1) news fcs<-predict(s.lm,news,interval=?predict?) fcs points(1+nrow(ptr),fcs[,1],col=?grey?,pch=19) points(1+...
2011 Dec 24
1
Need help! Trying to install USPS Shipping Assistant in WINE
...and Merry Christmas.. Lou $ wine C:\\Program\ Files\\USPS\\Shipping\ Assistant\\ShippingAssistant.exe fixme:sync:CreateMemoryResourceNotification (0) stub fixme:volume:GetVolumePathNameW (L"C:\\users\\goopaus\\Local Settings\\Application Data\\ShippingAssistant\\Database\\ShippingAssistant.sdf", 0x33e7bc, 261), stub! fixme:volume:GetVolumePathNameW (L"C:\\users\\goopaus\\Local Settings\\Application Data\\ShippingAssistant\\Database\\ShippingAssistant.sdf", 0x33e0a8, 261), stub! fixme:volume:GetVolumePathNameW (L"C:\\users\\goopaus\\Local Settings\\Application Data\\Sh...
2010 Aug 25
3
frequency, count rows, data for heat map
Hi all, I have read posts of heat map creation but I am one step prior -- Here is what I am trying to do and wonder if you have any tips? We are trying to map sequence reads from tumors to viral genomes. Example input file : 111 abc 111 sdf 111 xyz 1079 abc 1079 xyz 1079 xyz 5576 abc 5576 sdf 5576 sdf How may xyz's are there for 1079 and 111? How many abc's, etc? How many times did reads from sample (1079) align to virus xyz. In some cases there are thousands per virus in a give sample, sometimes one. The ori...
2014 Jun 20
1
iostat results for multi path disks
Here is a sample of running iostat on a server that has a LUN from a SAN with multiple paths. I am specifying a device list that just grabs the bits related to the multi path device: $ iostat -dxkt 1 2 sdf sdg sdh sdi dm-7 dm-8 dm-9 Linux 2.6.18-371.8.1.el5 (db21b.den.sans.org) 06/20/2014 Time: 02:30:23 PM Device: rrqm/s wrqm/s r/s w/s rkB/s wkB/s avgrq-sz avgqu-sz await svctm %util sdf 0.66 52.32 3.57 34.54 188.38 347.52 28.13 0.14 3.62 0.8...
2007 Dec 04
1
SD cards
Hi, I am trying to read a 4gb SD HD card class 6 [hispeed], and Centos 5.1 does not recognize it. with dmesg|less I get [1616752.815569] sdf: Mode Sense: 00 00 00 00 [1616752.815571] sdf: assuming drive cache: write through [1616754.813229] sdf : READ CAPACITY failed. [1616754.813231] sdf : status=0, message=00, host=1, driver=00 [1616754.813240] sdf : sense not available. When I connect through the same hardware a just 1Gb SD card,...
2012 Jan 22
1
Problem with sapa package and spectral density function (SDF)
Hi everybody, I'm a beginner R user and I'm trying to use the package "sapa" to estimate the spectral density function of several time series using the SDF function. For each time series, I want to calculate the density function at two temporal resolutions (daily and monthly). The monthly values calculated as a mean of the daily values. I first create a ts object for both series and then run the SDF function. The thing I can't figure out is why fo...
2012 Jan 26
2
Calculate a function repeatedly over sections of a ts object
Hi, I want to apply a function (in my case SDF; package ?sapa?) repeatedly over discrete sections of a daily time series object by sliding a time window of constant length (e.g. 10 consecutive years or 1825 days) over the entire ts at increments of 1 time unit (e.g. 1 year or 365 days). So for example, the first SDF would be calculated for the...
2018 Jan 31
1
Problems with "predict" function
...1,0,1) m mres<-m*(seq(1,12)) mres ssd<-rexp(1,1) ssd devs<-rep(0,length(mres)) for(i in 1:length(mres)){devs[i]<-rnorm(1,0,ssd)} devs plot(-10,-10,xlim=c(1,24),ylim=c(0,20000)) sales<-round((mres+devs)*1000) points(sales,pch=19) ptr<-cbind(1:length(sales),sales,sales,sales) ptr sdf<-data.frame(cbind(1:nrow(ptr),sales)) sdf colnames(sdf)<-c(?monat?,?mitte?) sdf attach(sdf) s.lm<-lm(mitte~monat) s.lm abline(s.lm,lty=2) news<-data.frame(monat=nrow(sdf)+1) news fcs<-predict(s.lm,news,interval="predict") fcs points(1+nrow(ptr),fcs[,1],col="grey&quo...
2018 Aug 13
1
vector arithmetic
I'm looking for where in the source recycling and vector multiplication+addition are defined. I see some stuff in ~/src/main/arithmetic.c. Is there anywhere else I should be looking as well? Cheers -- isomorphisms at sdf.org SDF Public Access UNIX System - http://sdf.org
2007 Dec 07
0
SQLiteDF SQLITE ERROR after attach
Dear list, i have installed SQLiteDF (and SQlite 3.5.3 too) After the suggested dataframe generation iris.sdf <- sqlite.data.frame(iris) i have close R and than restart it for verify the correct load of dataframe : the file data1 is saved in the usual folder .SQLiteDF after the command : attachSdf("c:/R/Report/.SQLiteDF/data1.db","iris.sdf") R give this error SQLITE ERROR (line 29...
2011 Mar 11
0
is gzcon w/ urls not implemented or used differently on linux?
...web with gzcon(url()) and it works perfectly on OSX, but I cannot get it to work on linux at all, trying several different R versions and linux distributions. Any ideas? Here's an example of my code: z <- gzcon(url("ftp://ftp-private.ncbi.nlm.nih.gov/pubchem/.fetch/8897497837079742771.sdf.gz")) sdf <- readLines(z) close(z) On linux it produces the following error: Error in readLines(z) : cannot open the connection The non-gzipped version works flawlessly on linux: con <- url("http://chemmine.ucr.edu/ChemMineToolsV2/static/example_db.sdf") sdf <- readLines(c...
2009 Jan 13
2
mounted.ocfs2 -f return Unknown: Bad magic number in inode
...re files are ocfs2 type. multipath is also used. When I issue : mounted.ocfs2 -f I have a strange result: Device FS Nodes /dev/sda ocfs2 Unknown: Bad magic number in inode /dev/sda1 ocfs2 pocrhel2, pocrhel1 /dev/sdb ocfs2 Not mounted /dev/sdf ocfs2 Unknown: Bad magic number in inode /dev/sdf1 ocfs2 pocrhel2, pocrhel1 /dev/sdg ocfs2 Not mounted /dev/dm-0 ocfs2 Unknown: Bad magic number in inode /dev/dm-4 ocfs2 pocrhel2, pocrhel1 Devices: sda and sdf are different paths...
2008 Aug 07
1
rsync: hlink.c:271: check_prior: Assertion `node->data != ((void *)0)' failed.
...WARRANTY. This is free software, and you are welcome to redistribute it under certain conditions. See the GNU General Public Licence for details. BLS #uname -a Linux gview.myfakedomain.nett 2.6.26.1 #1 SMP Sat Aug 2 15:03:02 ICT 2008 x86_64 GNU/Linux BLS #rsync -rltpcvxH --progress --delete /mnt/sdf1/dvd/source . sending incremental file list source/kernel/kernelpack2/ deleting source/kernel/kernelpack2/patch-2.6.26.1.bz2.sign deleting source/kernel/kernelpack2/patch-2.6.26.1.bz2 deleting source/kernel/kernelpack2/config-2.6.26.1.smp64 deleting source/kernel/kernelpack2/config-2.6.26.1.smp del...
2012 Mar 23
2
btrfs crash after disk reconnect
Observed on Linux 3.2.9 after the controller/disk flaked in-out. (The world still needs a SCSI error decoding tool to tell normal people what cmd and res are about.) [ 157.732885] device label srv devid 4 transid 11292 /dev/sdf [ 157.733201] btrfs: disk space caching is enabled [ 172.936515] device label srv devid 4 transid 11292 /dev/sdf [44106.091461] ata4.01: exception Emask 0x0 SAct 0x0 SErr 0x0 action 0x0 [44106.091470] ata4.01: BMDMA stat 0x64 [44106.091478] ata4.01: failed command: READ DMA EXT [44106.091492] ata...
2011 Feb 18
1
How to fsck.ocfs2
-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Hi everyone, simple question: how can I execute a "fsck.ocfs2 /dev/sdf"? All I get is - ---snip--- myhost:~ # fsck.ocfs2 /dev/sdf fsck.ocfs2 1.4.3 Checking OCFS2 filesystem in /dev/sdf: Label: SAP01 UUID: 5969C8CABB854F8EA9C17B5B8DE48EC6 Number of blocks: 183500800 Block size: 4096 Number of clusters: 183500800 C...
2013 Sep 04
2
Error Attaching Seventh VirtIO-SCSI Device to Guest
I have run into a problem attempting to attach the seventh virtio-scsi device to a RHEL 6.4 Guest from a RHEL 6.4 host running libvirt version 0.10.2-18. I have a guest that is running RHEL6.4 where I can attach disks sda(boot), sdb, sdc, sdd, sde and sdf but when I try to attach sdg the virsh attach-disk command fails with the error: error: Failed to attach disk error: internal error Unable to determine model for scsi controller I logged Bug 996327 on this issue including an attached script to repro the bug but there has been no activity on that...
2010 Sep 13
3
Proper procedure when device names have changed
I am running zfs-fuse on an Ubuntu 10.04 box. I have a dual mirrored pool: mirror sdd sde mirror sdf sdg Recently the device names shifted on my box and the devices are now sdc sdd sde and sdf. The pool is of course very unhappy about the mirrors are no longer matched up and one device is "missing". What is the proper procedure to deal with this? -brian -- This message posted from o...
2009 Aug 24
1
nchar on factors
In R 2.9.1 Windows: > nchar(factor(paste('sdf',1:10))) [1] 1 1 1 1 1 1 1 1 2 1 so it appears that nchar is counting the number of characters in the numeric representation, just like: > nchar(as.numeric(factor(paste('sdf',1:10)))) [1] 1 1 1 1 1 1 1 1 2 1 but ?nchar says explicitly: x: character vector, or a vector to b...
2016 May 25
6
Slow RAID Check/high %iowait during check after updgrade from CentOS 6.5 -> CentOS 7.2
...read? ? kB_wrtn sda? ? ? ? ? ? ? 52.59? ? ? 2033.16? ? ?10682.78 1210398902 6359779847 sdb? ? ? ? ? ? ? 52.46? ? ? 2031.25? ? ?10682.78 1209265338 6359779847 sdc? ? ? ? ? ? ? 52.40? ? ? 2033.21? ? ?10683.53 1210433924 6360229587 sdd? ? ? ? ? ? ? 52.22? ? ? 2031.16? ? ?10683.53 1209212513 6360229587 sdf? ? ? ? ? ? ? 52.20? ? ? 2031.17? ? ?10682.06 1209216701 6359354331 sdg? ? ? ? ? ? ? 52.62? ? ? 2033.22? ? ?10684.17 1210437080 6360606756 sdh? ? ? ? ? ? ? 52.57? ? ? 2031.21? ? ?10684.17 1209242746 6360606756 sde? ? ? ? ? ? ? 51.67? ? ? 2033.17? ? ?10682.06 1210408935 6359354331 sdj? ? ? ? ? ? ? 51...