search for: script_

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2012 Mar 18
1
install R package on Unix cluster
...I created the following PBS file to send a job array: #!/bin/bash -ue #PBS -m ae #PBS -M my email #PBS -J 1-45 #PBS -A my username #PBS -N job name #PBS -l resources #PBS -l walltime cd $PBS_O_WORKDIR module load R/2.14.1 R CMD INSTALL -l /path/to/library spatstat R CMD BATCH /path/to/folder/Script_$PBS_ARRAY_INDEX.R Obviosuly I failed to understand pag 19 of the R admin manual because I keep getting the following error message: Warning: invalid package ‘spatstat’ Error: ERROR: no packages specified I'd appreciate if you can point me in the right direction Thanks Lorenzo [[alternati...
2004 May 21
1
No load() from script
Hi, when I try to load data from a file _in a script_ (run either with R --vanilla < script.R, or R BATCH --vanilla script.R, or even with source() from inside R), then I got this error message and scripts halts > #data.multiple <- read.table(file="multiple.csv",sep="\t") > load(file="multiple.RData") E...