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2010 Sep 22
0
How to Ignore NaN values in Rows when using hclust function in making Heatmap??
...rman")),
method="complete")
myclhr <- cutree(hr, h=max(hr$height)/2); mycolhr <- sample(rainbow(256));
myclhc <- cutree(hc, h=max(hc$height)/2); mycolhc <- sample(rainbow(256));
mycolhr <- mycolhr[as.vector(myclhr)];
mycolhc <- mycolhc[as.vector(myclhc)];
jpeg("scaleRow.jpg", height=6+2/3, width=6+2/3, units="in", res=1200)
heatmap.2(mydatamatrix, Rowv=as.dendrogram(hr), Colv=as.dendrogram(hc),
dendrogram="both", scale="row", col=rev(heat.colors(10)), cexRow=0.08,
cexCol=0.08, trace="none", density.info="none"...